RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OR6C4Q8NGE1 309 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 ACOT12Q8WYK0 555 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 RBPMSQ93062 196 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 PLD4Q96BZ4 506 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 OR2M2Q96R28 347 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 OR51J1Q9H342 316 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 MVB12BQ9H7P6 319 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 ERVMER34-1Q9H9K5 563 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 GKN1Q9NS71 199 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 NUDT15Q9NV35 164 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 UCKL1Q9NWZ5 548 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 SCML1Q9UN30 329 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 TRAV6A0A075B6T7 132 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 NPIPB15A6NHN6 443 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 SLC38A8A6NNN8 435 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 PRRG1O14668 218 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 GBAP04062 536 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 SOAT1P35610 550 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF81P51508 661 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 PUDPQ08623 228 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 RIPPLY1Q0D2K3 151 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 GARNL3Q5VVW2 1013 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 RTL4Q6ZR62 310 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 OR4D11Q8NGI4 311 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 SLC38A5Q8WUX1 472 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 TMED9Q9BVK6 235 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 GPBP1L1Q9HC44 474 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 CYSLTR2Q9NS75 346 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 KCMF1Q9P0J7 381 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 FBXW2Q9UKT8 454 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 CACNG2Q9Y698 323 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 OR6C75A6NL08 312 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 KHNYNO15037 678 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 NME6O75414 186 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MTNR1AP48039 350 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 ACLYP53396 1101 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CCL23P55773 120 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SEMG2Q02383 582 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 TMEM81Q6P7N7 255 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CRTC1Q6UUV9 634 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 ARSKQ6UWY0 536 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 DEF8Q6ZN54 512 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 HSD17B8Q92506 261 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 OTUB1Q96FW1 271 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 WBP1Q96G27 269 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 RADILQ96JH8 1075 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 KLHL15Q96M94 604 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 LYSMD1Q96S90 227 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 WFDC6Q9BQY6 131 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 LYARQ9NX58 379 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 RABL2AQ9UBK7 228 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 FBXO9Q9UK97 447 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CEP350Q5VT06 3117 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 A0A1W2PRB8 838 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 COCHO43405 550 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SOCS5O75159 536 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MTRF1O75570 445 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SERPINI2O75830 405 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CFDP00746 253 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 AHCYP23526 432 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MMP11P24347 488 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SSTR2P30874 369 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 RPL3P39023 403 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CCT3P49368 545 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 GBX2P52951 348 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SMIM11AP58511 58 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 C2orf80Q0P641 193 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 NAE1Q13564 534 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 INSL4Q14641 139 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 NTRK2Q16620 822 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MINDY4Q4G0A6 757 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 FAM71E1Q6IPT2 247 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 AGTRAPQ6RW13 159 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SERPINA13PQ6UXR4 307 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 BMPERQ8N8U9 685 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 OR5M3Q8NGP4 307 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CEP76Q8TAP6 659 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 WBP2Q969T9 261 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 MED8Q96G25 268 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 GSX2Q9BZM3 304 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 TBC1D17Q9HA65 648 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 IMP3Q9NV31 184 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 CLCA2Q9UQC9 943 aa16.16■□□□□ 0.18
SQSTM1-211ENST00000506690 SCN10AQ9Y5Y9 1956 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 A0A1B0GVI7 797 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ARHGEF33A8MVX0 844 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 CACNB4O00305 520 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 KPNA5O15131 536 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 KLHL18O94889 574 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 BCHEP06276 602 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 RAB14P61106 215 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 DUSP4Q13115 394 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 NDUFA9Q16795 377 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 PODNL1Q6PEZ8 512 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 SLC36A4Q6YBV0 504 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ZER1Q7Z7L7 766 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 LRRC28Q86X40 367 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms