RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ASMTP46597 345 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 EMDP50402 254 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 NCBP2P52298 156 aaKnown RBP eCLIP16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 MAPKAPK3Q16644 382 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 KIRREL3Q8IZU9 778 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 GALNT11Q8NCW6 608 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 SLC22A8Q8TCC7 542 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 NUDT8Q8WV74 236 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 FAR1Q8WVX9 515 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 AMDHD1Q96NU7 426 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 SLX1AQ9BQ83 275 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 ITPAQ9BY32 194 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 BCAP29Q9UHQ4 241 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 ERVK-11Q9UQG0 969 aa16.85■□□□□ 0.29
PDLIM7-216ENST00000506537 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 ASPDHA6ND91 283 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 SDHDO14521 159 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 SCAMP2O15127 329 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PDPK1O15530 556 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PLOD3O60568 738 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 MPIP34949 423 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 NR0B1P51843 470 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 TDGF1P3P51864 188 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PPP2R2AP63151 447 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 EMX2Q04743 252 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 SMU1Q2TAY7 513 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 ZNF791Q3KP31 576 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 OPN5Q6U736 354 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 TMEM64Q6YI46 380 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 SLC15A4Q8N697 577 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 KRTCAP2Q8N6L1 136 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 BCORP1Q8N888 145 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PSD4Q8NDX1 1056 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 TP53INP1Q96A56 240 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 TMEM125Q96AQ2 219 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 ERP27Q96DN0 273 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 SPACA9Q96E40 222 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 FRMD6Q96NE9 622 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 NXF5Q9H1B4 397 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 DEPPQ9NTK1 212 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 ASIC5Q9NY37 505 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 ATP6V1HQ9UI12 483 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 EXPH5Q8NEV8 1989 aa16.84■□□□□ 0.29
PDLIM7-216ENST00000506537 MAST4O15021 2626 aa16.83■□□□□ 0.29
PDLIM7-216ENST00000506537 A0A0G2JMM0 328 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 A0A1W2PPB8 328 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 A0A1W2PRS3 328 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 KIR3DP1A8MWS1 328 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 WISP2O76076 250 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 FBXO45P0C2W1 286 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 KITP10721 976 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 G6PDP11413 515 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 PRPS2P11908 318 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 GNLYP22749 145 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 MST1P26927 711 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 MC3RP41968 323 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 FRKP42685 505 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 DIO3P55073 304 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 GPR85P60893 370 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 NNATQ16517 81 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 TMEM107Q6UX40 140 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 RTL4Q6ZR62 310 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 ZNF551Q7Z340 670 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 MAVSQ7Z434 540 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 ATCAYQ86WG3 371 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 WDR75Q8IWA0 830 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 SULF2Q8IWU5 870 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 CPSF7Q8N684 471 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 C17orf47Q8NEP4 570 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 OR7A2PQ8NGA2 310 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 NR4A3Q92570 626 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 MTERF3Q96E29 417 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 SH2D2AQ9NP31 389 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 TIMMDC1Q9NPL8 285 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 AGPAT4Q9NRZ5 378 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 OLAHQ9NV23 265 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 SH3BP4Q9P0V3 963 aa16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 KLF13Q9Y2Y9 288 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-216ENST00000506537 RP1L1Q8IWN7 2480 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 HDAC3O15379 428 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 VPS4BO75351 444 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 CBX6O95503 412 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 CCL3P10147 92 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 EFNA1P20827 205 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 HPCAL1P37235 193 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 MEOX1P50221 254 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 MAD2L1Q13257 205 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 RNFT1Q5M7Z0 435 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 HLA-DQA1Q5Y7H0 255 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 LARP4Q71RC2 724 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 RIMKLAQ8IXN7 391 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 GOLM1Q8NBJ4 401 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 VSTM2LQ96N03 204 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 NOP53Q9NZM5 478 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 PRODH2Q9UF12 536 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 VPS4AQ9UN37 437 aa16.82■□□□□ 0.28
PDLIM7-216ENST00000506537 EIF3LQ9Y262 564 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms