RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 FBXL8Q96CD0 374 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SMIM10Q96HG1 83 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CAPZA3Q96KX2 299 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 JSRP1Q96MG2 331 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 RUNDC3BQ96NL0 473 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 RASL10BQ96S79 203 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 AIF1LQ9BQI0 150 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 YIPF4Q9BSR8 244 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TTTY12Q9BZ98 90 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 FAM129AQ9BZQ8 928 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 BRINP2Q9C0B6 783 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 OR8D2Q9GZM6 311 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TRIM45Q9H8W5 580 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 PELI2Q9HAT8 420 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SEMA4BQ9NPR2 832 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 HOMER3Q9NSC5 361 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TRMT1Q9NXH9 659 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TUBA8Q9NY65 449 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CDC42EP3Q9UKI2 254 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ZKSCAN5Q9Y2L8 839 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 YARS2Q9Y2Z4 477 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 NUDT19A8MXV4 375 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 RTCAO00442 366 aaKnown RBP5.07□□□□□ -1.6
SPTA1-209ENST00000498708 B3GALT2O43825 422 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 LDB3O75112 727 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 H2AFYO75367 372 aaKnown RBP5.07□□□□□ -1.6
SPTA1-209ENST00000498708 P04436 131 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 C1GALT1C1LP0DN25 315 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CCL3P10147 92 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CNR1P21554 472 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 AHRP35869 848 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 PTH2RP49190 550 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 MAN2A2P49641 1150 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 GPR143P51810 404 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 AGFG1P52594 562 aaKnown RBP5.07□□□□□ -1.6
SPTA1-209ENST00000498708 WNT3P56703 355 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 STX4Q12846 297 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 PPP1R7Q15435 360 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 C1orf185Q5T7R7 199 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 WLSQ5T9L3 541 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 PRAMEF20Q5VT98 475 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 HLA-DQA1Q5Y7H0 255 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 FAM45BPQ6NSW5 357 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 NIPAL1Q6NVV3 410 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 HSDL2Q6YN16 418 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 FRA10AC1Q70Z53 315 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 SLC22A16Q86VW1 577 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 IGDCC3Q8IVU1 814 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 SCUBE1Q8IWY4 988 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 OR4N5Q8IXE1 308 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 PPIL6Q8IXY8 311 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 KLHDC8AQ8IYD2 350 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 SPATA6LQ8N4H0 392 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 LINC01356Q8N9X3 169 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 FAM45AQ8TCE6 357 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CREB3L4Q8TEY5 395 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 GIMAP1Q8WWP7 306 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 ATL1Q8WXF7 558 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CERS2Q96G23 380 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CCL19Q99731 98 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 ALOXE3Q9BYJ1 711 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 SLC6A15Q9H2J7 730 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 COPS7BQ9H9Q2 264 aaPredicted RBP5.07□□□□□ -1.6
SPTA1-209ENST00000498708 TNFRSF12AQ9NP84 129 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 AP5S1Q9NUS5 200 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 QPCTLQ9NXS2 382 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 ASIC3Q9UHC3 531 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CHMP2BQ9UQN3 213 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 VWA7Q9Y334 891 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 MMACHCQ9Y4U1 282 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 KCNE2Q9Y6J6 123 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 CLCA3PQ9Y6N3 262 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 VWFP04275 2813 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 RAI1Q7Z5J4 1906 aaPredicted RBP5.07□□□□□ -1.6
SPTA1-209ENST00000498708 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
SPTA1-209ENST00000498708 YLPM1P49750 1951 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 EML6Q6ZMW3 1958 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TRGV5A0A0B4J1U4 118 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ANKDD1BA6NHY2 528 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 A8MV72 311 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 C17orf105B2RV13 164 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 KDM4EB2RXH2 506 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SAP18O00422 153 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 CES2O00748 559 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 DNALI1O14645 258 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 BCKDKO14874 412 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 E2F6O75461 281 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 PIAS1O75925 651 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ETHE1O95571 254 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TP53P04637 393 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SERPINA6P08185 405 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 RFPL3SP0C7P2 107 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 BMP5P22003 454 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 RBMXP38159 391 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ELK3P41970 407 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms