RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 OR52B6Q8NGF0 335 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 NTNG2Q96CW9 530 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 APOPT1Q96IL0 206 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 ATP6V1G3Q96LB4 118 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 CXorf21Q9HAI6 301 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 CNIH4Q9P003 139 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 CPSF2Q9P2I0 782 aaKnown RBP17■□□□□ 0.31
PRKCB-209ENST00000498058 GRID1Q9ULK0 1009 aa17■□□□□ 0.31
PRKCB-209ENST00000498058 ZNF469Q96JG9 3925 aaPredicted RBP17■□□□□ 0.31
PRKCB-209ENST00000498058 FOXE1O00358 373 aaPredicted RBP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 DYRK3O43781 588 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 UGDHO60701 494 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 SLC35E2P0CK97 266 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 SERPINB3P29508 390 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 GALNSP34059 522 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 IST1P53990 364 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 CRYZQ08257 329 aaKnown RBP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 DUSP8Q13202 625 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 TECRLQ5HYJ1 363 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 DESI1Q6ICB0 168 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 CYP20A1Q6UW02 462 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 ARSKQ6UWY0 536 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 ZZZ3Q8IYH5 903 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 ZNF615Q8N8J6 731 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 TNIP2Q8NFZ5 429 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 ADIPOR1Q96A54 375 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 NSUN5Q96P11 429 aaKnown RBP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 PELOQ9BRX2 385 aaKnown RBP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 CENPKQ9BS16 269 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 DOHHQ9BU89 302 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 NOL11Q9H8H0 719 aaKnown RBP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 ZBTB26Q9HCK0 441 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 MED4Q9NPJ6 270 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRKCB-209ENST00000498058 QPCTLQ9NXS2 382 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 PSD3Q9NYI0 1048 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 DTX4Q9Y2E6 619 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 MPDZO75970 2070 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 NF1P21359 2839 aa16.99■□□□□ 0.31
PRKCB-209ENST00000498058 A0A1B0GTL3 188 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 C2orf92A0A1B0GVN3 265 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 OR6C76A6NM76 312 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 CTAG2O75638 210 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 GABRA1P14867 456 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 S1PR1P21453 382 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 GDF1P27539 372 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 SOX18P35713 384 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 FUT7Q11130 342 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 SLC25A35Q3KQZ1 300 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 CCDC153Q494R4 210 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 SH2D5Q6ZV89 423 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 RPS27LQ71UM5 84 aaKnown RBP16.98■□□□□ 0.31
PRKCB-209ENST00000498058 EXOC3L1Q86VI1 746 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 NUDT13Q86X67 352 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 DND1Q8IYX4 353 aaKnown RBP16.98■□□□□ 0.31
PRKCB-209ENST00000498058 PRR22Q8IZ63 422 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 MMP21Q8N119 569 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 PTGR2Q8N8N7 351 aaPredicted RBP16.98■□□□□ 0.31
PRKCB-209ENST00000498058 BANPQ8N9N5 519 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 SPPL2AQ8TCT8 520 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 DIO2Q92813 273 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 ZBTB9Q96C00 473 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 TLCD1Q96CP7 247 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 TIMP4Q99727 224 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 MRPL57Q9BQC6 102 aaKnown RBP16.98■□□□□ 0.31
PRKCB-209ENST00000498058 UBQLN3Q9H347 655 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 MID2Q9UJV3 735 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 NPFFR2Q9Y5X5 522 aa16.98■□□□□ 0.31
PRKCB-209ENST00000498058 ANKRD33BA6NCL7 494 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 ZWINTO95229 277 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 CEACAM8P31997 349 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 MAGOHP61326 146 aaKnown RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 PHEXP78562 749 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 TBL3Q12788 808 aaKnown RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 TRAF3Q13114 568 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 ACSF3Q4G176 576 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 OR52E8Q6IFG1 317 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 SIMC1Q8NDZ2 872 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 TP53INP1Q96A56 240 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 REPS1Q96D71 796 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 PHF21BQ96EK2 531 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 OR10A5Q9H207 317 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 MRPL46Q9H2W6 279 aaKnown RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 DNAJB12Q9NXW2 375 aaKnown RBP16.97■□□□□ 0.31
PRKCB-209ENST00000498058 CRIM1Q9NZV1 1036 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 TMCO1Q9UM00 188 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 SLC6A5Q9Y345 797 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 PCDHGB3Q9Y5G1 929 aa16.97■□□□□ 0.31
PRKCB-209ENST00000498058 DOCK7Q96N67 2140 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 ANKHD1Q8IWZ3 2542 aaKnown RBP16.96■□□□□ 0.31
PRKCB-209ENST00000498058 FAM221AA4D161 298 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 CLDN9O95484 217 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 KLK1P06870 262 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 TAC1P20366 129 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 DUSP2Q05923 314 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 MGAT2Q10469 447 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 RPS6KA2Q15349 733 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 DCST1Q5T197 706 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 GALNT12Q8IXK2 581 aa16.96■□□□□ 0.31
PRKCB-209ENST00000498058 LIX1Q8N485 282 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms