RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-227ENST00000498056 MAP1BP46821 2468 aaKnown RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 A0A087WV62 115 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 A0A096LPI6 279 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 UPK1AO00322 258 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 FBP2O00757 339 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 EMC8O43402 210 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 PLOD3O60568 738 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 CLPSP04118 112 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 IGKV3-11P04433 115 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 ITGA3P26006 1051 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 PRDX6P30041 224 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 CLCN2P51788 898 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 CXADRP78310 365 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 MGAT2Q10469 447 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 STX5Q13190 355 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 DUSP8Q13202 625 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 TLR1Q15399 786 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 NNATQ16517 81 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 TRMT5Q32P41 509 aaKnown RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 CRTC2Q53ET0 693 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 DCAF10Q5QP82 559 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 FHL5Q5TD97 284 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 ZNF621Q6ZSS3 439 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 SLC29A4Q7RTT9 530 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 OR2L13Q8N349 312 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 PCYOX1LQ8NBM8 494 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 APCDD1LQ8NCL9 501 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 NUP43Q8NFH3 380 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 OR7G1Q8NGA0 311 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 PNPT1Q8TCS8 783 aaKnown RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 MOAP1Q96BY2 351 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 CTHRC1Q96CG8 243 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 OTUB1Q96FW1 271 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 SENP5Q96HI0 755 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 ITPAQ9BY32 194 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 ZNF223Q9UK11 482 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-227ENST00000498056 DTX4Q9Y2E6 619 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 ZFHX4Q86UP3 3567 aa12.62□□□□□ -0.39
CPNE1-227ENST00000498056 A0A087WV48 116 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 TAF4O00268 1085 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 PLOD2O00469 737 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 AIM2O14862 343 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 ITGAMP11215 1152 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 UQCRC2P22695 453 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 SOX18P35713 384 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 CCT3P49368 545 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 SLC37A1P57057 533 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 RPS26P62854 115 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 MXRA7P84157 204 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 FUT7Q11130 342 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 AIMP2Q13155 320 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 RAPSNQ13702 412 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 LASP1Q14847 261 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 EBPQ15125 230 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 IRAK1BP1Q5VVH5 260 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 HSDL2Q6YN16 418 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 WDR53Q7Z5U6 358 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 KBTBD2Q8IY47 623 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 TMEM102Q8N9M5 508 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 GOT1L1Q8NHS2 421 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 C16orf52Q8NHV5 167 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 PSMA8Q8TAA3 256 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 M1APQ8TC57 530 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 THAP3Q8WTV1 239 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 AURKBQ96GD4 344 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 FOLH1BQ9HBA9 442 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 MMP25Q9NPA2 562 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 ZNF639Q9UID6 485 aa12.61□□□□□ -0.39
CPNE1-227ENST00000498056 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 HEMK1Q9Y5R4 338 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-227ENST00000498056 OR6C76A6NM76 312 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 K7ENP7 123 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ERN1O75460 977 aaKnown RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 BCAS2O75934 225 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 DNAJB5O75953 348 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 UBOX5O94941 541 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SERPINA7P05543 415 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 IFI6P09912 130 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 S1PR1P21453 382 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 TRPC1P48995 793 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 CASP9P55211 416 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 AP2B1P63010 937 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 RNF4P78317 190 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 VAC14Q08AM6 782 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 Q0VFX4 171 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ART3Q13508 389 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ZNHIT3Q15649 155 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 LRIF1Q5T3J3 769 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 BHLHB9Q6PI77 547 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms