RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 JPT2Q9H910 190 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 ROPN1Q9HAT0 212 aaPredicted RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 CTSZQ9UBR2 303 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 SPATA2Q9UM82 520 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 AURKCQ9UQB9 309 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 CPQQ9Y646 472 aa3.29□□□□□ -1.88
SMC4-225ENST00000497203 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.29□□□□□ -1.88
SMC4-225ENST00000497203 SYNJ2O15056 1496 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 NCAPD2Q15021 1401 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ATP8B3O60423 1300 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 FAM230AA0A1W2PPH8 454 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 E9PMD0 336 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 SGK494L7N484 410 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 EI24O14681 340 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 STK17BO94768 372 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 PTBP3O95758 552 aaKnown RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 HPRP00739 348 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 FCGR3AP08637 254 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 MAT2AP31153 395 aaKnown RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 PRDX2P32119 198 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 SGSHP51688 502 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 SLC7A2P52569 658 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 MS4A2Q01362 244 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 FCHO2Q0JRZ9 810 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ITPK1Q13572 414 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 SIX1Q15475 284 aaPredicted RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 CEBPEQ15744 281 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 UNC50Q53HI1 259 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 TCHHL1Q5QJ38 904 aaPredicted RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 REP15Q6BDI9 236 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 STXBP4Q6ZWJ1 553 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 RPAINQ86UA6 219 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ZNF440Q8IYI8 595 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 BCORP1Q8N888 145 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ZNF397Q8NF99 534 aaPredicted RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 WDR36Q8NI36 951 aaKnown RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 SSC4DQ8WTU2 575 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 CCDC51Q96ER9 411 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ZNF597Q96LX8 424 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 LRRCC1Q9C099 1032 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 LIME1Q9H400 295 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 RPAP3Q9H6T3 665 aaPredicted RBP3.28□□□□□ -1.88
SMC4-225ENST00000497203 ECT2Q9H8V3 914 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 VAT1LQ9HCJ6 419 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 STARD5Q9NSY2 213 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 ANKMY1Q9P2S6 941 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 EMCNQ9ULC0 261 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 MGAT4BQ9UQ53 548 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 KLHDC2Q9Y2U9 406 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 KIF3AQ9Y496 699 aa3.28□□□□□ -1.88
SMC4-225ENST00000497203 RGSL1A5PLK6 1076 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 F8WDY8 70 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 CLDN3O15551 220 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ADAM12O43184 909 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 NOL3O60936 208 aaKnown RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 SCGB2A1O75556 95 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 TOM1L1O75674 476 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 AKR7A3O95154 331 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 NDUFA7O95182 113 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 NUDT14O95848 222 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 SLC35G4P0C7Q5 338 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 RRASP10301 218 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 HSD17B1P14061 328 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 FUT1P19526 365 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 PTPN6P29350 595 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ATP4BP51164 291 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 MTTPP55157 894 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 NOP14P78316 857 aaKnown RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 IL9RQ01113 521 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 PRKCEQ02156 737 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ACY1Q03154 408 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 HSF2Q03933 536 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 PAX8Q06710 450 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 BNIP1Q12981 228 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 PDZK1IP1Q13113 114 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 RAPSNQ13702 412 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ANKRD55Q3KP44 614 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 LDLRAP1Q5SW96 308 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 WDR25Q64LD2 544 aaPredicted RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 ZNF772Q68DY9 489 aaPredicted RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 ZCCHC12Q6PEW1 402 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ATRAIDQ6UW56 229 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ABRAXAS1Q6UWZ7 409 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ISLR2Q6UXK2 745 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 PAQR9Q6ZVX9 377 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 P4HA3Q7Z4N8 544 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 LRRC49Q8IUZ0 686 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 MISPQ8IVT2 679 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 CENPSQ8N2Z9 138 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 C4orf32Q8N8J7 132 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 MAPK1IP1LQ8NDC0 245 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 GIPC3Q8TF64 312 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 ZNF689Q96CS4 500 aaPredicted RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 RBM18Q96H35 190 aaKnown RBP3.27□□□□□ -1.89
SMC4-225ENST00000497203 FICDQ9BVA6 458 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 GPR174Q9BXC1 333 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 DPH5Q9H2P9 285 aa3.27□□□□□ -1.89
SMC4-225ENST00000497203 HEXA-AS1Q9H8Q6 139 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms