RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	QSOX2	Q6ZRP7	698 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATCAY	Q86WG3	371 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NRROS	Q86YC3	692 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BEST3	Q8N1M1	668 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR11H4	Q8NGC9	324 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR5M9	Q8NGP3	310 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RXFP4	Q8TDU9	374 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RFK	Q969G6	155 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMARCD1	Q96GM5	515 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR2M4	Q96R27	311 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NTPCR	Q9BSD7	190 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC27A6	Q9Y2P4	619 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PKD1L3	Q7Z443	1732 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RRN3P2	A6NIE6	340 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PPP6C	O00743	305 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR2T1	O43869	369 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CS	O75390	466 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MT-ND4	P03905	459 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SBK3	P0C264	359 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PRPS2	P11908	318 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AHCY	P23526	432 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CHI3L1	P36222	383 aa	Predicted RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAGEB1	P43366	347 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NFKB2	Q00653	900 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KIAA0141	Q14154	515 aa	Predicted RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DCST1	Q5T197	706 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HIST2H3PS2	Q5TEC6	136 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NOTUM	Q6P988	496 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POMZP3	Q6PJE2	187 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TRIM46	Q7Z4K8	759 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C2orf69	Q8N8R5	385 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR52E4	Q8NGH9	312 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TBC1D20	Q96BZ9	403 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SUCNR1	Q9BXA5	334 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CALML5	Q9NZT1	146 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GNG14	A0A1W2PPG7	69 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549		M0R129	80 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PPP1R2P9	O14990	202 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TLX2	O43763	284 aa	Predicted RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SCN2B	O60939	215 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FZD7	O75084	574 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	STBD1	O95210	358 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CSF2RA	P15509	400 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPCAM	P16422	314 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PSMB1	P20618	241 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SOAT1	P35610	550 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SERPINF1	P36955	418 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC16A1	P53985	500 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PKIA	P61925	76 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM132D	Q14C87	1099 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TRAM1	Q15629	374 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	B3GLCT	Q6Y288	498 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF546	Q86UE3	836 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EIF4E3	Q8N5X7	224 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF383	Q8NA42	475 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SELENOM	Q8WWX9	145 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC39A7	Q92504	469 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MRPS24	Q96EL2	167 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MS4A3	Q96HJ5	214 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LRR1	Q96L50	414 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RIOK2	Q9BVS4	552 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GABARAPL3	Q9BY60	117 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GPR61	Q9BZJ8	451 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RNF32	Q9H0A6	362 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C20orf85	Q9H1P6	137 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ISYNA1	Q9NPH2	558 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TLR8	Q9NR97	1041 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANGPT4	Q9Y264	503 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	COL1A2	P08123	1366 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMCO3	A2RU48	225 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NPEPPSL1	A6NEC2	478 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM200C	A6NKL6	621 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TARM1	B6A8C7	271 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACKR2	O00590	384 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC7A4	O43246	635 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF623	O75123	536 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LRAT	O95237	230 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	VNN2	O95498	520 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SULT1A3	P0DMM9	295 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SULT1A4	P0DMN0	295 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPHA2	P29317	976 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BPIFB3	P59826	476 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MRPS10	P82664	201 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAP2	Q03519	686 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.78	□□□□□ -1.16	4e-6	■■■□□ 16.3
CRNKL1-205	ENST00000496549	GTDC1	Q4AE62	458 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ETV3L	Q6ZN32	361 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	USP50	Q70EL3	339 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ASPG	Q86U10	573 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SERINC5	Q86VE9	423 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF283	Q8N7M2	679 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	UBAC2	Q8NBM4	344 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RHEBL1	Q8TAI7	183 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C15orf40	Q8WUR7	153 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KCTD12	Q96CX2	325 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KATNB1	Q9BVA0	655 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MINDY3	Q9H8M7	445 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GBA2	Q9HCG7	927 aa	Predicted RBP	7.78	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms