RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 UBFD1O14562 309 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 EFSO43281 561 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 DKK1O94907 266 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 CRYABP02511 175 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 FURINP09958 794 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 GTF2E2P29084 291 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ARHGDIAP52565 204 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 TRMT5Q32P41 509 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 LARP4Q71RC2 724 aaKnown RBP eCLIP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 FKBP9P1Q75LS8 142 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 PATL1Q86TB9 770 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 IFNEQ86WN2 208 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 DNAJB14Q8TBM8 379 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 REXO5Q96IC2 774 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 JSRP1Q96MG2 331 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 OR52B2Q96RD2 323 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 LDAHQ9H6V9 325 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 RUBCNLQ9H714 662 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 RAXQ9Y2V3 346 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 A0A087WV62 115 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 A0A096LPI6 279 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LOC101059948A0A1B0GTJ6 334 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 B2RBV5 119 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 FAM227AF5H4B4 570 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 GNGT2O14610 69 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMPRSS11DO60235 418 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 DRD4P21917 467 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 DIO3P55073 304 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 DSTNP60981 165 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 UFM1P61960 85 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 COQ5Q5HYK3 327 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 DCAF10Q5QP82 559 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 PLAG1Q6DJT9 500 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 FAM180AQ6UWF9 173 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM107Q6UX40 140 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMPRSS9Q7Z410 1059 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR8K3Q8NH51 312 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 DIO2Q92813 273 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 KAT2AQ92830 837 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SPATA9Q9BWV2 254 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ADNPQ9H2P0 1102 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SDR39U1Q9NRG7 319 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SACM1LQ9NTJ5 587 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 C6orf203Q9P0P8 240 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SUCOQ9UBS9 1254 aaKnown RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RPS6KA6Q9UK32 745 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ASB4Q9Y574 426 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ATRXP46100 2492 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF28P17035 718 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ME2P23368 584 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 GABRA3P34903 492 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LASP1Q14847 261 aaKnown RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 CYP27C1Q4G0S4 372 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 C19orf48Q6RUI8 117 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 FAM198BQ6UWH4 519 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM64Q6YI46 380 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF440Q8IYI8 595 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SLC34A3Q8N130 599 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LGI4Q8N135 537 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR52R1Q8NGF1 315 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR8J2Q8NGG1 315 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SLC2A12Q8TD20 617 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TSLPQ969D9 159 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LRRC46Q96FV0 321 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RNF145Q96MT1 663 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LMF1Q96S06 567 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 CDCP1Q9H5V8 836 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 COPG1Q9Y678 874 aaKnown RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 AKAP13Q12802 2813 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TEX51A0A1B0GUA7 166 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 NDUFB5O43674 189 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 FGF17O60258 216 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SMIM10L1P0DMW3 83 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 NAGAP17050 411 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RBBP4Q09028 425 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF630Q2M218 657 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RTL4Q6ZR62 310 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 LINC00696Q6ZRV3 163 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ANKRD46Q86W74 232 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 MISPQ8IVT2 679 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 CYP4Z2PQ8N1L4 340 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RNF175Q8N4F7 328 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR7A2PQ8NGA2 310 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR1N1Q8NGS0 311 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 OR9A2Q8NGT5 310 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF675Q8TD23 568 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM234Q8WY98 164 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 VPS33AQ96AX1 596 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 ZHX1-C8orf76Q96EF9 292 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 SMIM10Q96HG1 83 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RSRC1Q96IZ7 334 aaKnown RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 NRTNQ99748 197 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 KCTD14Q9BQ13 255 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms