RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 VPS29Q9UBQ0 182 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF639Q9UID6 485 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 KIAA1549Q9HCM3 1950 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 WDR1O75083 606 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ERAL1O75616 437 aaKnown RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 CBX7O95931 251 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 HSD3B1P14060 373 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ATP5F1P24539 256 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 HSD3B2P26439 372 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ABCD3P28288 659 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 MSX1P28360 303 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ADH7P40394 386 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 PRKAA2P54646 552 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 LTB4RQ15722 352 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 NNATQ16517 81 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 GPRIN3Q6ZVF9 776 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ADCY4Q8NFM4 1077 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ACMSDQ8TDX5 336 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 SARAFQ96BY9 339 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 CTHRC1Q96CG8 243 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 NTNG2Q96CW9 530 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 L3HYPDHQ96EM0 354 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 CNRIP1Q96F85 164 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF597Q96LX8 424 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 JSRP1Q96MG2 331 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-209ENST00000496445 RILPQ96NA2 401 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 BRINP2Q9C0B6 783 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 GSTO2Q9H4Y5 243 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 EXO5Q9H790 373 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ACKR4Q9NPB9 350 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 QPCTLQ9NXS2 382 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 ACAD8Q9UKU7 415 aa13.09□□□□□ -0.31
VTI1A-209ENST00000496445 A0A0G2JNJ9 132 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 TP53I11O14683 189 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 GUCY1B2O75343 617 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 KRT6AP02538 564 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 KRT6BP04259 564 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 IL3P08700 152 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 CSNK2A2P19784 350 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-209ENST00000496445 IMPDH1P20839 514 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 SSTR2P30874 369 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 KRT6CP48668 564 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 TRPC1P48995 793 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 ALDH9A1P49189 494 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 TMED10P49755 219 aaKnown RBP13.08□□□□□ -0.32
VTI1A-209ENST00000496445 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 LCP2Q13094 533 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 TBCELQ5QJ74 424 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 C1orf185Q5T7R7 199 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 SLC22A9Q8IVM8 553 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 METTL6Q8TCB7 284 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 C14orf79Q96F83 325 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 APIPQ96GX9 242 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
VTI1A-209ENST00000496445 ANGPTL4Q9BY76 406 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 NMRK1Q9NWW6 199 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 Q9UFV3 132 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 TBK1Q9UHD2 729 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
VTI1A-209ENST00000496445 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 CAPN14A8MX76 684 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 G3V2L1 256 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 UBFD1O14562 309 aaKnown RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 PCDH7O60245 1069 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 PPM1BO75688 479 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 SHBGP04278 402 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 ABCB1P08183 1280 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 GSTA1P08263 222 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 PCSK2P16519 638 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 GDF1P27539 372 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 HMOX2P30519 316 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 DEKP35659 375 aaKnown RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 CASP3P42574 277 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 FOXA1P55317 472 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 NRG3P56975 720 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 MRPS35P82673 323 aaKnown RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 HMGCS1Q01581 520 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 TRMT12Q53H54 448 aaKnown RBP13.07□□□□□ -0.32
VTI1A-209ENST00000496445 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 WLSQ5T9L3 541 aa13.07□□□□□ -0.32
VTI1A-209ENST00000496445 SH2D5Q6ZV89 423 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms