RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 PCBD2Q9H0N5 130 aa10.88□□□□□ -0.67
CDCA7-208ENST00000496441 DDX31Q9H8H2 851 aaKnown RBP10.88□□□□□ -0.67
CDCA7-208ENST00000496441 A4GALTQ9NPC4 353 aa10.88□□□□□ -0.67
CDCA7-208ENST00000496441 C14orf119Q9NWQ9 140 aa10.88□□□□□ -0.67
CDCA7-208ENST00000496441 REV1Q9UBZ9 1251 aa10.88□□□□□ -0.67
CDCA7-208ENST00000496441 APOBEC3BQ9UH17 382 aaKnown RBP10.88□□□□□ -0.67
CDCA7-208ENST00000496441 ENTPD4Q9Y227 616 aa10.88□□□□□ -0.67
CDCA7-208ENST00000496441 GPR55Q9Y2T6 319 aaPredicted RBP10.88□□□□□ -0.67
CDCA7-208ENST00000496441 NUP210Q8TEM1 1887 aaPredicted RBP10.88□□□□□ -0.67
CDCA7-208ENST00000496441 MAN2B1O00754 1011 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PRKYO43930 277 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 DPM1O60762 260 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ERGP11308 486 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 C5AR1P21730 350 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 TRIM23P36406 574 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 HMGA2P52926 109 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 RPS21P63220 83 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 CSNK2BP67870 215 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 SIM1P81133 766 aaPredicted RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 RPE65Q16518 533 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ZER1Q7Z7L7 766 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PHOSPHO2Q8TCD6 241 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 APOBEC4Q8WW27 367 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PATE1Q8WXA2 126 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 NEURL2Q9BR09 285 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 FAIM2Q9BWQ8 316 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 CDADC1Q9BWV3 514 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PLA2G12AQ9BZM1 189 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ERVK13-1Q9NX77 482 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 GSAPA4D1B5 854 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PDE9AO76083 593 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 RASGRP1O95267 797 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 AZGP1P25311 298 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ATP5A1P25705 553 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 CD40LGP29965 261 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ACTR1BP42025 376 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 EIF2B2P49770 351 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 TAS2R41P59536 307 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ACTR1AP61163 376 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 FUT5Q11128 374 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 HYAL2Q12891 473 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 GINS1Q14691 196 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 SHHQ15465 462 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 SNAPC1Q16533 368 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 DUSP6Q16828 381 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 CCNJQ5T5M9 372 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PLAG1Q6DJT9 500 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ACSM5Q6NUN0 579 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ABHD17CQ6PCB6 329 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 KIAA1324Q6UXG2 1013 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 USP43Q70EL4 1123 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 AMER2Q8N7J2 671 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 ZFP41Q8N8Y5 198 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 FCGR1BQ92637 280 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 LRR1Q96L50 414 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 APOOQ9BUR5 198 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 NUAK2Q9H093 628 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 MTIF3Q9H2K0 278 aaKnown RBP10.87□□□□□ -0.67
CDCA7-208ENST00000496441 SNTG1Q9NSN8 517 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 PLCXD1Q9NUJ7 323 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 TOR4AQ9NXH8 423 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
CDCA7-208ENST00000496441 CACNB4O00305 520 aaPredicted RBP10.86□□□□□ -0.67
CDCA7-208ENST00000496441 EPPINO95925 133 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 ERVK-21P61565 698 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 OXA1LQ15070 435 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 ITPRIPL2Q3MIP1 535 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TMEM196Q5HYL7 178 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
CDCA7-208ENST00000496441 NIPAL1Q6NVV3 410 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 RRM2BQ7LG56 351 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 CADM3Q8N126 398 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TBC1D19Q8N5T2 526 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 SUN3Q8TAQ9 357 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TSSK6Q9BXA6 273 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 POLR2J2Q9GZM3 115 aaKnown RBP10.86□□□□□ -0.67
CDCA7-208ENST00000496441 PALMDQ9NP74 551 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 PRDM7Q9NQW5 492 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TMEM74BQ9NUR3 256 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TBCCD1Q9NVR7 557 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 FRYLO94915 3013 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 K7EQS6 105 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 CLEC3AO75596 197 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 GPX5O75715 221 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 ZNF888P0CJ79 500 aaPredicted RBP10.86□□□□□ -0.67
CDCA7-208ENST00000496441 COL9A1P20849 921 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 HSD17B2P37059 387 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 SSX1Q16384 188 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 OR2G6Q5TZ20 316 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 STEAP3Q658P3 488 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 MTSS1LQ765P7 747 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 C16orf62Q7Z3J2 963 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 NUP43Q8NFH3 380 aa10.86□□□□□ -0.67
CDCA7-208ENST00000496441 FAM46AQ96IP4 442 aaKnown RBP10.86□□□□□ -0.67
CDCA7-208ENST00000496441 TMEM168Q9H0V1 697 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms