RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SFSWAPQ12872 951 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 CEBPEQ15744 281 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 C18orf63Q68DL7 685 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 C12orf73Q69YU5 71 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 NIPAL1Q6NVV3 410 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 USP30Q70CQ3 517 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 NRROSQ86YC3 692 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 GJD3Q8N144 294 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 IL17RCQ8NAC3 791 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 MINDY2Q8NBR6 621 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 WDR36Q8NI36 951 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 NR4A3Q92570 626 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 GAL3ST3Q96A11 431 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SIPA1Q96FS4 1042 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 IL4I1Q96RQ9 567 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 FUZQ9BT04 418 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ALOXE3Q9BYJ1 711 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 DSN1Q9H410 356 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 TBC1D29Q9UFV1 150 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 APOBEC3BQ9UH17 382 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 DAPK2Q9UIK4 370 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SLC13A4Q9UKG4 626 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 CES1P1Q9UKY3 287 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 LIPT1Q9Y234 373 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 IFT52Q9Y366 437 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 RPL36Q9Y3U8 105 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 A3GALT2U3KPV4 340 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SNRNP200O75643 2136 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 TICRRQ7Z2Z1 1910 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 GOLGA4Q13439 2230 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 LOC100506127A0A0U1RQW1 187 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 EPOPA6NHQ4 379 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ENTPD6O75354 484 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SLC35G6P0C7Q6 338 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ALPPL2P10696 532 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 IFNA8P32881 189 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 DGKEP52429 567 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 NFATC4Q14934 902 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 TMEM201Q5SNT2 666 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ATAD3BQ5T9A4 648 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 PODNL1Q6PEZ8 512 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 BTLAQ7Z6A9 289 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 MFSD4AQ8N468 514 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 NUP43Q8NFH3 380 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 KLHL6Q8WZ60 621 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 OTUB1Q96FW1 271 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 DACH2Q96NX9 599 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 MGLLQ99685 303 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 WFDC6Q9BQY6 131 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ROGDIQ9GZN7 287 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 RACGAP1Q9H0H5 632 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SRMSQ9H3Y6 488 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 TRIM45Q9H8W5 580 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SLC25A19Q9HC21 320 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 MSRAQ9UJ68 235 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 KLHL20Q9Y2M5 609 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 A0A1W2PQF6 199 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 FUOMA2VDF0 154 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 POM121BA6NF01 834 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CCRL2O00421 344 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 SYT5O00445 386 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ADAM23O75077 832 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 KLF8O95600 359 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 NR2F6P10588 404 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 GSTM3P21266 225 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 PSMD7P51665 324 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 BTN3A2P78410 334 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 FUT5Q11128 374 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF750Q32MQ0 723 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TBC1D25Q3MII6 688 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF311Q5JNZ3 666 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 RD3Q7Z3Z2 195 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ASPGQ86U10 573 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 PAQR7Q86WK9 346 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 SAMD14Q8IZD0 417 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR4K5Q8NGD3 323 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR6T1Q8NGN1 323 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 JPH3Q8WXH2 748 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ELP4Q96EB1 424 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 WDR92Q96MX6 357 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 MROQ9BYG7 248 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 SLC28A3Q9HAS3 691 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 DNAAF2Q9NVR5 837 aaKnown RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CCDC59Q9P031 241 aaKnown RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 KLF15Q9UIH9 416 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 URADA6NGE7 173 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 METTL15A6NJ78 407 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 DUXAA6NLW8 204 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 BTN3A3O00478 584 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TPST2O60704 377 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ALPPP05187 535 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TNNI3P19429 210 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 COL9A1P20849 921 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 AK4P27144 223 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CD40LGP29965 261 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CSTF2P33240 577 aaKnown RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms