RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	CNR1	P21554	472 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	MST1	P26927	711 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	MAPK1	P28482	360 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	ABCE1	P61221	599 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	DCAF7	P61962	342 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF628	Q5EBL2	1059 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	XKR7	Q5GH72	579 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM111B	Q6SJ93	734 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	TICAM1	Q8IUC6	712 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZFP62	Q8NB50	900 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	C16orf52	Q8NHV5	167 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	ADIPOR1	Q96A54	375 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	EXOSC8	Q96B26	276 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	TLCD1	Q96CP7	247 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	SPACA9	Q96E40	222 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	BBS4	Q96RK4	519 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	GAL3ST4	Q96RP7	486 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	SACM1L	Q9NTJ5	587 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	SEC14L3	Q9UDX4	400 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	PRODH2	Q9UF12	536 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	EXO1	Q9UQ84	846 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	RAP2C	Q9Y3L5	183 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	CNTRL	Q7Z7A1	2325 aa		11.42	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMEM120B	A0PK00	339 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	PLOD3	O60568	738 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	TBX19	O60806	448 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	UNC5C	O95185	931 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	CBX7	O95931	251 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899		P04436	131 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	IFI6	P09912	130 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	ZNF24	P17028	368 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	NAGA	P17050	411 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	DDX5	P17844	614 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	DRD5	P21918	477 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	VAMP1	P23763	118 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	TACR1	P25103	407 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SOX18	P35713	384 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	ASMT	P46597	345 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SLC1A6	P48664	564 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	TMED10	P49755	219 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	MEOX1	P50221	254 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	NR0B1	P51843	470 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	NRG3	P56975	720 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	MAGOH	P61326	146 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	PSPH	P78330	225 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	PMP22	Q01453	160 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	DUSP2	Q05923	314 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	RBPJ	Q06330	500 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	STX3	Q13277	289 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	TRMT12	Q53H54	448 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	HHAT	Q5VTY9	493 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	CES4A	Q5XG92	561 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SLC22A10	Q63ZE4	541 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM180B	Q6P0A1	224 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	GFRAL	Q6UXV0	394 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	RGS9BP	Q6ZS82	235 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SIAH3	Q8IW03	269 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM9C	Q8IZT9	166 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	DEPDC4	Q8N2C3	294 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	CPSF7	Q8N684	471 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	ADCY4	Q8NFM4	1077 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	CDC26	Q8NHZ8	85 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	AGR3	Q8TD06	166 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	PAQR8	Q8TEZ7	354 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	MTERF3	Q96E29	417 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	EGLN2	Q96KS0	407 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	GPR137	Q96N19	417 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SECISBP2	Q96T21	854 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	FAM173A	Q9BQD7	235 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	SH2D2A	Q9NP31	389 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	CNIH4	Q9P003	139 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	BCAP29	Q9UHQ4	241 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	HAO1	Q9UJM8	370 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	NPFFR2	Q9Y5X5	522 aa		11.41	□□□□□ -0.58
MRPL55-233	ENST00000495899	NBAS	A2RRP1	2371 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899		A0A087WV62	115 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	ANKRD33B	A6NCL7	494 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	PLOD2	O00469	737 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	TP53I11	O14683	189 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	ACOX3	O15254	700 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	ASNA1	O43681	348 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	ITM2A	O43736	263 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	AGFG2	O95081	481 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	STS	P08842	583 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	BCKDHA	P12694	445 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	PCSK2	P16519	638 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	SDC1	P18827	310 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	GPX3	P22352	226 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	NTS	P30990	170 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	PPIC	P45877	212 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	EMD	P50402	254 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	RPL14	P50914	215 aa	Known RBP	11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	RPL38	P63173	70 aa	Known RBP	11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	LTB4R	Q15722	352 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	NTRK2	Q16620	822 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	SMU1	Q2TAY7	513 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	GALNTL6	Q49A17	601 aa		11.4	□□□□□ -0.58
MRPL55-233	ENST00000495899	ATP6AP1L	Q52LC2	224 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms