RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PTGER1P34995 402 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 HOXD12P35452 270 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 RELAQ04206 551 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 COX10Q12887 443 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 NDUFA9Q16795 377 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 ZNF750Q32MQ0 723 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 COL13A1Q5TAT6 717 aaPredicted RBP14.46□□□□□ -0.1
CALD1-222ENST00000495522 PRAMEF8Q5VWM4 474 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 PRAMEF7Q5VXH5 474 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 SLC48A1Q6P1K1 146 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 TUBA3EQ6PEY2 450 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 SYCE2Q6PIF2 218 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 C19orf48Q6RUI8 117 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 CD300LDQ6UXZ3 194 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 OLIG3Q7RTU3 272 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 OR8J1Q8NGP2 316 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 KLHL6Q8WZ60 621 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 ARPC5LQ9BPX5 153 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 CENPOQ9BU64 300 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 TRMT61BQ9BVS5 477 aaKnown RBP14.46□□□□□ -0.1
CALD1-222ENST00000495522 GIMAP4Q9NUV9 329 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 GIN1Q9NXP7 522 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 DNAJC27Q9NZQ0 273 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 CES1P1Q9UKY3 287 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 SNX7Q9UNH6 387 aa14.46□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3DA0A087WVF3 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3IA0A087WXS9 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3EA0A087X179 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3KA0A087X1G2 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3FA6NER0 549 aaPredicted RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3LB9A6J9 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TAF4O00268 1085 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 CCRL2O00421 344 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 DSCR3O14972 297 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 SCAMP1O15126 338 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 ALOX5P09917 674 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3HP0C7X1 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 F3P13726 295 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 PORP16435 677 aaPredicted RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 NTSR1P30989 418 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 CSTF2P33240 577 aaKnown RBP eCLIP14.45□□□□□ -0.19e-7■■■■□ 19.9
CALD1-222ENST00000495522 RAB8AP61006 207 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 STXBP1P61764 594 aaKnown RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 PRR5P85299 388 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 DUSP2Q05923 314 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TSTQ16762 297 aaKnown RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 C18orf63Q68DL7 685 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3GQ6DHY5 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3CQ6IPX1 549 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 ZNF425Q6IV72 752 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 TBC1D3Q8IZP1 549 aaPredicted RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 PRRC1Q96M27 445 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 OR2M4Q96R27 311 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 PINK1Q9BXM7 581 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 C6orf62Q9GZU0 229 aaPredicted RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 SLC6A17Q9H1V8 727 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 FGF22Q9HCT0 170 aa14.45□□□□□ -0.1
CALD1-222ENST00000495522 APOBEC3BQ9UH17 382 aaKnown RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 RPL36Q9Y3U8 105 aaKnown RBP14.45□□□□□ -0.1
CALD1-222ENST00000495522 PRSS38A1L453 326 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 AGAP5A6NIR3 686 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 CCDC85CA6NKD9 419 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 ISM1B1AKI9 464 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 SLC31A1O15431 190 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 EMC8O43402 210 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 EPPINO95925 133 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 TP53P04637 393 aaPredicted RBP14.44□□□□□ -0.1
CALD1-222ENST00000495522 C8orf89P0DMQ9 161 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 BUD31P41223 144 aaPredicted RBP14.44□□□□□ -0.1
CALD1-222ENST00000495522 RHAGQ02094 409 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.44□□□□□ -0.1
CALD1-222ENST00000495522 TGM3Q08188 693 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 NCF4Q15080 339 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 GPAT3Q53EU6 434 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 SOWAHCQ53LP3 525 aaPredicted RBP14.44□□□□□ -0.1
CALD1-222ENST00000495522 SDR16C5Q8N3Y7 309 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 OR6T1Q8NGN1 323 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 TMEM80Q96HE8 168 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 CDADC1Q9BWV3 514 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 RNF167Q9H6Y7 350 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 MAN2C1Q9NTJ4 1040 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 LYARQ9NX58 379 aaKnown RBP14.44□□□□□ -0.1
CALD1-222ENST00000495522 OR6C2Q9NZP2 312 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 KLHL20Q9Y2M5 609 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 ARHGAP33O14559 1287 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 PROM1O43490 865 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 ASGR2P07307 311 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 CHRM5P08912 532 aaPredicted RBP14.44□□□□□ -0.1
CALD1-222ENST00000495522 TNNI3P19429 210 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 TGM1P22735 817 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 MMP11P24347 488 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 MPIP34949 423 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 OCLNQ16625 522 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 TMEM196Q5HYL7 178 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 TJAP1Q5JTD0 557 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 SDE2Q6IQ49 451 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 PLEKHG7Q6ZR37 379 aa14.44□□□□□ -0.1
CALD1-222ENST00000495522 ATCAYQ86WG3 371 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms