RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 PMPCAQ10713 525 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 GTF3C1Q12789 2109 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 TRMT12Q53H54 448 aaKnown RBP13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 RTL6Q6ICC9 239 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 TMEM211Q6ICI0 200 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 OR52R1Q8NGF1 315 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 SPPL2AQ8TCT8 520 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 EBPLQ9BY08 206 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 TRIM8Q9BZR9 551 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 RUBCNLQ9H714 662 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 EXO5Q9H790 373 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 ANKRA2Q9H9E1 313 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 ACAD8Q9UKU7 415 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 PSME2Q9UL46 239 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 FAM215AQ9Y5M1 114 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 ZNF780BQ9Y6R6 833 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 FBN2P35556 2912 aa13.08□□□□□ -0.32
RPRD1B-206ENST00000495457 ZNF407Q9C0G0 2248 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 GNG14A0A1W2PPG7 69 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ANKRD33BA6NCL7 494 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 FAM90A27PA6NNH2 459 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 CAPN14A8MX76 684 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TP53I11O14683 189 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 SUSD5O60279 629 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 PLIN3O60664 434 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 HCN1O60741 890 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TRIM3O75382 744 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ENO1P06733 434 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 PCSK2P16519 638 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ACVR2AP27037 513 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ABCD3P28288 659 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TIA1P31483 386 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 PTGER4P35408 488 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TRPC1P48995 793 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 NAGLUP54802 743 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 NRG3P56975 720 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ACSM2AQ08AH3 577 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 SPIN4Q56A73 249 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ACSM2BQ68CK6 577 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TDRPQ86YL5 185 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 CCDC116Q8IYX3 515 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 C17orf47Q8NEP4 570 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 RND1Q92730 232 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 CCDC126Q96EE4 140 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 RILPQ96NA2 401 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ALKBH4Q9NXW9 302 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 STK38LQ9Y2H1 464 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 ABCA12Q86UK0 2595 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 EML6Q6ZMW3 1958 aa13.07□□□□□ -0.32
RPRD1B-206ENST00000495457 LRBAP50851 2863 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 FIGNL2A6NMB9 653 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 GDF1P27539 372 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 CHRNB4P30926 498 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 CRHR1P34998 444 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 CASP3P42574 277 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ZNF628Q5EBL2 1059 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 TBCELQ5QJ74 424 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 FNDC7Q5VTL7 733 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 GDF7Q7Z4P5 450 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 OR9A2Q8NGT5 310 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 LILRB4Q8NHJ6 448 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 SARAFQ96BY9 339 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ANGPTL4Q9BY76 406 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 SHCBP1LQ9BZQ2 653 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 ACKR4Q9NPB9 350 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
RPRD1B-206ENST00000495457 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
RPRD1B-206ENST00000495457 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
RPRD1B-206ENST00000495457 PPM1BO75688 479 aa13.05□□□□□ -0.32
RPRD1B-206ENST00000495457 ANXA4P09525 319 aaPredicted RBP13.05□□□□□ -0.32
RPRD1B-206ENST00000495457 GLI4P10075 376 aa13.05□□□□□ -0.32
RPRD1B-206ENST00000495457 DRD2P14416 443 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms