RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ACSS1Q9NUB1 689 aaPredicted RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ADAM29Q9UKF5 820 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PCOLCE2Q9UKZ9 415 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 SEC16AO15027 2179 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SGK494L7N484 410 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 NDUFS2O75306 463 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 ELAVL4P26378 380 aaKnown RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 AKT2P31751 481 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 VSX2P58304 361 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 MLLT1Q03111 559 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 FZD5Q13467 585 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 ABI3BPQ7Z7G0 1075 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 METTL27Q8N6F8 245 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 AVL9Q8NBF6 648 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 NUP43Q8NFH3 380 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 GAB3Q8WWW8 586 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SLC35A4Q96G79 324 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 OR7D2Q96RA2 312 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 RAB11FIP5Q9BXF6 653 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 GABARAPL3Q9BY60 117 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 DUSP21Q9H596 190 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 LMAN1LQ9HAT1 526 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 MAN2C1Q9NTJ4 1040 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SNX7Q9UNH6 387 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SPTY2D1-AS1A0A0U1RR47 76 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 HYAL3O43820 417 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 TBX19O60806 448 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 STSP08842 583 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 CT62P0C5K7 136 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 CBLP22681 906 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 CNR2P34972 360 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 TRHRP34981 398 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 MAN2A2P49641 1150 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 EMP3P54852 163 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 VBP1P61758 197 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 ABATP80404 500 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 ILF3Q12906 894 aaKnown RBP eCLIP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 NFATC3Q12968 1075 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 COL19A1Q14993 1142 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 TMEM35AQ53FP2 167 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 NDNFQ8TB73 568 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 PITX2Q99697 317 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 DOK1Q99704 481 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 LRRC61Q9BV99 259 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SEMA3GQ9NS98 782 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 WSB2Q9NYS7 404 aaPredicted RBP9.76□□□□□ -0.85
SAMM50-206ENST00000494795 SCML1Q9UN30 329 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 NAALAD2Q9Y3Q0 740 aa9.76□□□□□ -0.85
SAMM50-206ENST00000494795 C10orf142B7Z368 130 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 HRKO00198 91 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 FGF17O60258 216 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 DRD2P14416 443 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GABRB1P18505 474 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 NTSP30990 170 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GRK5P34947 590 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 XKP51811 444 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 MAP4K2Q12851 820 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 EPS8Q12929 822 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 EXOSC7Q15024 291 aaKnown RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 CTF1Q16619 201 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 RFX4Q33E94 735 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 Q7L0L9 218 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 TBC1D19Q8N5T2 526 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GPBAR1Q8TDU6 330 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 SLC9A6Q92581 669 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GGHQ92820 318 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 CDS1Q92903 461 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 TM4SF19Q96DZ7 209 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 NRBF2Q96F24 287 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 NECTIN4Q96NY8 510 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 SARGQ9BW04 601 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 SLC38A1Q9H2H9 487 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 C8orf33Q9H7E9 229 aaPredicted RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 VCX3AQ9NNX9 186 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 REV1Q9UBZ9 1251 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 IL20RAQ9UHF4 553 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 FAM32AQ9Y421 112 aaKnown RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GPC6Q9Y625 555 aaPredicted RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 MAGEB3O15480 346 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 OR10H3O60404 316 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 CCNB2O95067 398 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 PCSK2P16519 638 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 JUNBP17275 347 aaPredicted RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 RHCEP18577 417 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 CPN2P22792 545 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 PSMB9P28065 219 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 GGT2P36268 569 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 NCS1P62166 190 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 SHC2P98077 582 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 PIK3R3Q92569 461 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 FAIM2Q9BWQ8 316 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 YTHDF1Q9BYJ9 559 aaKnown RBP9.75□□□□□ -0.85
SAMM50-206ENST00000494795 KCND3Q9UK17 655 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 CORINQ9Y5Q5 1042 aa9.75□□□□□ -0.85
SAMM50-206ENST00000494795 J3QRK9 145 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms