RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 DLX3O60479 287 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 HCN1O60741 890 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 WDR1O75083 606 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CBX7O95931 251 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 OTCP00480 354 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CTAGE8P0CG41 777 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 COL6A2P12110 1019 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 GDF1P27539 372 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 SERPINB3P29508 390 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 HSD17B3P37058 310 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 PTGDSP41222 190 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 MAPK12P53778 367 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 RAE1P78406 368 aaKnown RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 MRPS35P82673 323 aaKnown RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CRYZQ08257 329 aaKnown RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 TAOK1Q7L7X3 1001 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CTAGE4Q8IX94 777 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 ULK2Q8IYT8 1036 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 DND1Q8IYX4 353 aaKnown RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 TAGAPQ8N103 731 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 VWA5B2Q8N398 1253 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CDYL2Q8N8U2 506 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 OR10Q1Q8NGQ4 319 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 NEIL3Q8TAT5 605 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 MZB1Q8WU39 189 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 SELENOMQ8WWX9 145 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 SARAFQ96BY9 339 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 CNRIP1Q96F85 164 aaPredicted RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF681Q96N22 645 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 EXO5Q9H790 373 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 ACKR4Q9NPB9 350 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 ALKBH4Q9NXW9 302 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 TRPS1Q9UHF7 1281 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF639Q9UID6 485 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 TMCO1Q9UM00 188 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 C15orf41Q9Y2V0 281 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 SLC6A5Q9Y345 797 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 L3MBTL1Q9Y468 752 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 NPFFR2Q9Y5X5 522 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 IKBKGQ9Y6K9 419 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 C1orf226A1L170 272 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ANKRD33BA6NCL7 494 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 C17orf51A8MQB3 221 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 GOLGA8RI6L899 631 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 MANBAO00462 879 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ATP1B1P05026 303 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ABCB1P08183 1280 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ABHD2P08910 425 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 SNRPAP09012 282 aaKnown RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 HOXD4P09016 255 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 PORP16435 677 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 PCSK2P16519 638 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 CNTFP26441 200 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 CASP3P42574 277 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ZFP36L2P47974 494 aaKnown RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 CLCQ05315 142 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 TRMT12Q53H54 448 aaKnown RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 EIPR1Q53HC9 387 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF678Q5SXM1 525 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 C10orf62Q5T681 223 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 WLSQ5T9L3 541 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 POMZP3Q6PJE2 187 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 PAGE2Q7Z2X7 111 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 TNIP2Q8NFZ5 429 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 HGDQ93099 445 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 TP53INP1Q96A56 240 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 CTHRC1Q96CG8 243 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 KLHL29Q96CT2 875 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 GNRHR2Q96P88 292 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 NODALQ96S42 347 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ANGPTL4Q9BY76 406 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ACPTQ9BZG2 426 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 BRF2Q9HAW0 419 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 GALNT9Q9HCQ5 603 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 EMCNQ9ULC0 261 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 PLLPQ9Y342 182 aa10.65□□□□□ -0.7
VTI1A-208ENST00000494728 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-208ENST00000494728 ZANQ9Y493 2812 aa10.65□□□□□ -0.71
VTI1A-208ENST00000494728 C15orf38-AP3S2A0A0A6YYH1 394 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 GNB5O14775 395 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 RIPK2O43353 540 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 PPM1BO75688 479 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 SUPT7LO94864 414 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 HPNP05981 417 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 IL3P08700 152 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 PTPN6P29350 595 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 ALDH9A1P49189 494 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 CDK9P50750 372 aaKnown RBP10.64□□□□□ -0.71
VTI1A-208ENST00000494728 FOXA1P55317 472 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 HMGCS1Q01581 520 aa10.64□□□□□ -0.71
VTI1A-208ENST00000494728 PRSS53Q2L4Q9 553 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms