RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CRISPLD2Q9H0B8 497 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 TSPAN10Q9H1Z9 355 aaPredicted RBP3.84□□□□□ -1.79
ATG3-207ENST00000494571 PRDM13Q9H4Q3 707 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 CCDC86Q9H6F5 360 aaKnown RBP3.84□□□□□ -1.79
ATG3-207ENST00000494571 MEAF6Q9HAF1 191 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 CDHR5Q9HBB8 845 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 EML4Q9HC35 981 aaKnown RBP3.84□□□□□ -1.79
ATG3-207ENST00000494571 DCP1AQ9NPI6 582 aaPredicted RBP3.84□□□□□ -1.79
ATG3-207ENST00000494571 C19orf12Q9NSK7 152 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 MS4A12Q9NXJ0 267 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 GDE1Q9NZC3 331 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 PTTG3PQ9NZH4 202 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 NTMQ9P121 344 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 PSORS1C1Q9UIG5 152 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 ACSL6Q9UKU0 697 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 NUBP2Q9Y5Y2 271 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 KIAA1551Q9HCM1 1747 aa3.84□□□□□ -1.79
ATG3-207ENST00000494571 MEIKINA0A087WXM9 373 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 A0A1B0GVI7 797 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PLSCR5A0PG75 271 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 SLC35F4A4IF30 521 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 A6NLC8 198 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 C6orf229H3BNL8 230 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CASKO14936 926 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 SLC16A4O15374 487 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TGM5O43548 720 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PRPSAP2O60256 369 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FADS1O60427 444 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 EFCAB14O75071 495 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 RAD17O75943 681 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FGF19O95750 216 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 MBPP02686 304 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 HPXP02790 462 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FAM157BP0CG42 384 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CYP19A1P11511 503 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 PEPDP12955 493 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CD19P15391 556 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ACHEP22303 614 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CPT2P23786 658 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PAX6P26367 422 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 S100A11P31949 105 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 AHRP35869 848 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TAGLN2P37802 199 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 ARL4AP40617 200 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 HSPA7P48741 367 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 NDUFA6P56556 154 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 EEFSECP57772 596 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 AP3S2P59780 193 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 SIM1P81133 766 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 SLC25A11Q02978 314 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 ZNF155Q12901 538 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 MTMR1Q13613 665 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 HTR4Q13639 388 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CELF3Q5SZQ8 465 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 SYPL2Q5VXT5 272 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CD276Q5ZPR3 534 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 C1orf94Q6P1W5 598 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FIGNL1Q6PIW4 674 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TMEM108Q6UXF1 575 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 IL20RBQ6UXL0 311 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 LARP4Q71RC2 724 aaKnown RBP eCLIP3.84□□□□□ -1.8
ATG3-207ENST00000494571 TMUB2Q71RG4 321 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 LRP11Q86VZ4 500 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PTRH1Q86Y79 214 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 THNSL2Q86YJ6 484 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ZDHHC21Q8IVQ6 265 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FAM126BQ8IXS8 530 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PHACTR4Q8IZ21 702 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 RNF113BQ8IZP6 322 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 OR4F6Q8NGB9 312 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CYP2W1Q8TAV3 490 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 NEK7Q8TDX7 302 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 STYXQ8WUJ0 223 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ACOT12Q8WYK0 555 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 C22orf15Q8WYQ4 148 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ZNF599Q96NL3 588 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CLCC1Q96S66 551 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 CGRRF1Q99675 332 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 YIPF4Q9BSR8 244 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TMEM208Q9BTX3 173 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ALG8Q9BVK2 526 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TLNRD1Q9H1K6 362 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TDRD3Q9H7E2 651 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 BCO1Q9HAY6 547 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TCF7L1Q9HCS4 588 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PRDM7Q9NQW5 492 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 ENAMQ9NRM1 1142 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 TEX10Q9NXF1 929 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 MRPL15Q9P015 296 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 METTL1Q9UBP6 276 aaKnown RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 ZNF223Q9UK11 482 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 ING1Q9UK53 422 aaPredicted RBP3.84□□□□□ -1.8
ATG3-207ENST00000494571 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 FLVCR2Q9UPI3 526 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 PCDHB7Q9Y5E2 793 aa3.84□□□□□ -1.8
ATG3-207ENST00000494571 NAV1Q8NEY1 1877 aa3.83□□□□□ -1.8
ATG3-207ENST00000494571 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.83□□□□□ -1.8
ATG3-207ENST00000494571 BCLAF3A2AJT9 711 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms