RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NELL2Q99435 816 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 EPHA6Q9UF33 1036 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 DHDHQ9UQ10 334 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 SPO11Q9Y5K1 396 aa18.25■□□□□ 0.51
COL27A1-207ENST00000494090 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 PCP4L1A6NKN8 68 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 ANHXE9PGG2 379 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 LAMP1P11279 417 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 FBXO46Q6PJ61 603 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-207ENST00000494090 TMEM107Q6UX40 140 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 SCD5Q86SK9 330 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 C16orf78Q8WTQ4 265 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 C11orf98E9PRG8 122 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 M0R129 80 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 LETMD1Q6P1Q0 360 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF709Q8N972 641 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 CCDC32Q9BV29 185 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 VSTM2BA6NLU5 285 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 WASH4PA8MWX3 477 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 FRKP42685 505 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-207ENST00000494090 MALLQ13021 153 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 PAGE3Q5JUK9 113 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 RABEPKQ7Z6M1 372 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 RHBDF1Q96CC6 855 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 SLC17A9Q9BYT1 436 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 MYH3P11055 1940 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 DNAJC25-GNG10A0A024R161 153 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 CIB4A0PJX0 185 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 UGDHO60701 494 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 MRPS14O60783 128 aaKnown RBP18.24■□□□□ 0.51
COL27A1-207ENST00000494090 APOL3O95236 402 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF806P0C7X5 589 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 NDUFV2P19404 249 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 RBMS1P29558 406 aaKnown RBP18.24■□□□□ 0.51
COL27A1-207ENST00000494090 DCDC5Q6ZRR9 648 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 C12orf76Q8N812 135 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-207ENST00000494090 GATAD2BQ8WXI9 593 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 TTTY10Q9BZA0 68 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 LHPPQ9H008 270 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 ACSL6Q9UKU0 697 aa18.24■□□□□ 0.51
COL27A1-207ENST00000494090 LAMB4A4D0S4 1761 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 FTCDNL1E5RQL4 147 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 GABBR2O75899 941 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 SORBS2O94875 1100 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF35P13682 527 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 GPX3P22352 226 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 SLC9A3P48764 834 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RPS26P62854 115 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 TSPAN33Q86UF1 283 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 CBARPQ8N350 705 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RNF38Q9H0F5 515 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ZDHHC7Q9NXF8 308 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 GPR83Q9NYM4 423 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RDH8Q9NYR8 311 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 PIAS3Q9Y6X2 628 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 C13orf42A0A1B0GVH6 325 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 NOTOA8MTQ0 251 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ADORA3P0DMS8 318 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 C6orf183Q5T699 404 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 DENND6BQ8NEG7 585 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 C17orf50Q8WW18 174 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 NRG4Q8WWG1 115 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 APIPQ96GX9 242 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 HPF1Q9NWY4 346 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 FARSAQ9Y285 508 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 MAB21L2Q9Y586 359 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 MBLAC1A4D2B0 266 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 FOXD2O60548 495 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RGS9O75916 674 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 VNN2O95498 520 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 SEMA4FO95754 770 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 GCAP28676 217 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 MAGEA8P43361 318 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 DTWD1Q8N5C7 304 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 OR13J1Q8NGT2 312 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 CCDC120Q96HB5 630 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 EMCNQ9ULC0 261 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 MYH7P12883 1935 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 EEF1E1O43324 174 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 LILRB3O75022 631 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 CNMDO75829 334 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RPS17P08708 135 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 PPP5CP53041 499 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 TAS2R38P59533 333 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 CHRFAM7AQ494W8 412 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RAB12Q6IQ22 244 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF100Q8IYN0 542 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ASCC1Q8N9N2 400 aaKnown RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 DRAXINQ8NBI3 349 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-207ENST00000494090 OR51A7Q8NH64 312 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 OR1F2PQ96R84 312 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 ENPP4Q9Y6X5 453 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
COL27A1-207ENST00000494090 CLCA1A8K7I4 914 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 A8MV72 311 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 MITFO75030 526 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 BPNT1O95861 308 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 CD3GP09693 182 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms