RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LGI4Q8N135 537 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 KRTCAP2Q8N6L1 136 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 OR7A2PQ8NGA2 310 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ZFP28Q8NHY6 868 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ZNF675Q8TD23 568 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ACTRT2Q8TDY3 377 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 KAT2AQ92830 837 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 CIDECQ96AQ7 238 aaPredicted RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 SNRNP40Q96DI7 357 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 MTERF3Q96E29 417 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 THOC1Q96FV9 657 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 ZNF764Q96H86 408 aaPredicted RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 MARK4Q96L34 752 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 OR52B2Q96RD2 323 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 NPAS2Q99743 824 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 DPY30Q9C005 99 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 PLA2G3Q9NZ20 509 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 BCAP29Q9UHQ4 241 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 SLC5A6Q9Y289 635 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 B3GNT3Q9Y2A9 372 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ZNF195O14628 629 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 TBX19O60806 448 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 WDPCPO95876 746 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CLPSP04118 112 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 PCSK2P16519 638 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 EFNA1P20827 205 aaPredicted RBP10.74□□□□□ -0.69
CTSA-209ENST00000493522 PRPS1L1P21108 318 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 MPIP34949 423 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 GPC1P35052 558 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 AQP5P55064 265 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 NME5P56597 212 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CLDN8P56748 225 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 SLC37A1P57057 533 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 MLF1P58340 268 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 OC90Q02509 493 aaPredicted RBP10.74□□□□□ -0.69
CTSA-209ENST00000493522 FUT7Q11130 342 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CEBPEQ15744 281 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 ZNF628Q5EBL2 1059 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CPTPQ5TA50 214 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 HLA-DQA1Q5Y7H0 255 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 EPGNQ6UW88 154 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 IGFL2Q6UWQ7 119 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 TMEM107Q6UX40 140 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 IGFL3Q6UXB1 125 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 OR5L2Q8NGL0 311 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 OR8K3Q8NH51 312 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CEP70Q8NHQ1 597 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 SUN3Q8TAQ9 357 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 MAELQ96JY0 434 aaKnown RBP10.74□□□□□ -0.69
CTSA-209ENST00000493522 AMDHD1Q96NU7 426 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 LMF1Q96S06 567 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 WWTR1Q9GZV5 400 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 RNF32Q9H0A6 362 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.74□□□□□ -0.69
CTSA-209ENST00000493522 OR10A5Q9H207 317 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 GLIPR2Q9H4G4 154 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 LIN28AQ9H9Z2 209 aaKnown RBP10.74□□□□□ -0.69
CTSA-209ENST00000493522 NPHS2Q9NP85 383 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 TCF7L2Q9NQB0 619 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 ATAD3AQ9NVI7 634 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 ASF1BQ9NVP2 202 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 AIG1Q9NVV5 245 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 ANKRD10Q9NXR5 420 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 TAS2R7Q9NYW3 318 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 STMN3Q9NZ72 180 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 ATP6V1HQ9UI12 483 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 MAPRE3Q9UPY8 281 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CSAG2Q9Y5P2 127 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 CACNA1DQ01668 2161 aa10.74□□□□□ -0.69
CTSA-209ENST00000493522 TEP1Q99973 2627 aaKnown RBP10.74□□□□□ -0.69
CTSA-209ENST00000493522 OR5H15A6NDH6 313 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 ANKUB1A6NFN9 424 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 OR6C76A6NM76 312 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 WWP2O00308 870 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 PRAMEF2O60811 474 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 ITGA10O75578 1167 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 OR2J2O76002 312 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 TGDSO95455 350 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 CBX6O95503 412 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 CBX7O95931 251 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 VIMP08670 466 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 LAMP1P11279 417 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 MDH1P40925 334 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 MC3RP41968 323 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 IDH3AP50213 366 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 SSR4P51571 173 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 CLNS1AP54105 237 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 MGAT2Q10469 447 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 MAP4K2Q12851 820 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 ZNF155Q12901 538 aaPredicted RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 EBPQ15125 230 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 RPS6KA2Q15349 733 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 PGS1Q32NB8 556 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 LSM12Q3MHD2 195 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 PLEKHN1Q494U1 663 aaPredicted RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 TRMT12Q53H54 448 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 TMEM198Q66K66 360 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 C16orf47Q6ZP98 133 aaPredicted RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 ZNF551Q7Z340 670 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms