RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TMEM107Q6UX40 140 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 ZNF551Q7Z340 670 aaPredicted RBP12.93□□□□□ -0.34
CCM2-217ENST00000492883 CYP4Z2PQ8N1L4 340 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SLC15A4Q8N697 577 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 NATD1Q8N6N6 113 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 TMEM178AQ8NBL3 297 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 MDS2Q8NDY4 140 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 OR7G2Q8NG99 324 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 TP53INP1Q96A56 240 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 TRIM45Q9H8W5 580 aaPredicted RBP12.93□□□□□ -0.34
CCM2-217ENST00000492883 ANKRA2Q9H9E1 313 aa12.93□□□□□ -0.34
CCM2-217ENST00000492883 A0A087WV62 115 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 A0A1W2PRB8 838 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 PLOD2O00469 737 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ZNF195O14628 629 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 SLC25A12O75746 678 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 RASAL1O95294 804 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 TGDSO95455 350 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 EFNA1P20827 205 aaPredicted RBP12.92□□□□□ -0.34
CCM2-217ENST00000492883 GPX3P22352 226 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 SOX18P35713 384 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 MC3RP41968 323 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 EMDP50402 254 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 NRG3P56975 720 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 RPUSD3Q6P087 351 aaKnown RBP12.92□□□□□ -0.34
CCM2-217ENST00000492883 EPGNQ6UW88 154 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 RGS9BPQ6ZS82 235 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ACAD11Q709F0 780 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 MAVSQ7Z434 540 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ACTRT2Q8TDY3 377 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ADIPOR1Q96A54 375 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 COQ8BQ96D53 544 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
CCM2-217ENST00000492883 ELP4Q96EB1 424 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 HES7Q9BYE0 225 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
CCM2-217ENST00000492883 DDX18Q9NVP1 670 aaKnown RBP12.92□□□□□ -0.34
CCM2-217ENST00000492883 TAS2R9Q9NYW1 312 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
CCM2-217ENST00000492883 CAPN14A8MX76 684 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 UPK1AO00322 258 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 CFLARO15519 480 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 ZNF354AO60765 605 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 COQ9O75208 318 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 NME6O75414 186 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 ALDOCP09972 364 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 DRD5P21918 477 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 FRKP42685 505 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 PPICP45877 212 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 NME5P56597 212 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 C21orf58P58505 322 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 DCAF7P61962 342 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 SRSF11Q05519 484 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 DUSP8Q13202 625 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 LSM12Q3MHD2 195 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 PRR30Q53SZ7 412 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 GALNTL5Q7Z4T8 443 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 ZNF227Q86WZ6 799 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 FAM98AQ8NCA5 519 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 SCMH1Q96GD3 660 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 LCORQ96JN0 433 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 MAELQ96JY0 434 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 SGCZQ96LD1 299 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 TRIM4Q9C037 500 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 BHLHE41Q9C0J9 482 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 C3orf14Q9HBI5 128 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 RYDENQ9NUL5 291 aaKnown RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 AIG1Q9NVV5 245 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 C19orf53Q9UNZ5 99 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 DTX4Q9Y2E6 619 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 KLF13Q9Y2Y9 288 aaPredicted RBP12.91□□□□□ -0.34
CCM2-217ENST00000492883 PCDHGB6Q9Y5F9 930 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
CCM2-217ENST00000492883 UBDO15205 165 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 NADKO95544 446 aaPredicted RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 IDH3AP50213 366 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 CDK9P50750 372 aaKnown RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 CLNS1AP54105 237 aaKnown RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 PRKAG1P54619 331 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 AQP5P55064 265 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 UFM1P61960 85 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 MLC1Q15049 377 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 INAQ16352 499 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 NNATQ16517 81 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 FHL5Q5TD97 284 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 TMEM198Q66K66 360 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms