RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 PSD3Q9NYI0 1048 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 ZNF629Q9UEG4 869 aaPredicted RBP18.23■□□□□ 0.51
NELFE-212ENST00000492539 FOXD3Q9UJU5 478 aaPredicted RBP18.23■□□□□ 0.51
NELFE-212ENST00000492539 CBLCQ9ULV8 474 aa18.23■□□□□ 0.51
NELFE-212ENST00000492539 FLNAP21333 2647 aaKnown RBP18.23■□□□□ 0.51
NELFE-212ENST00000492539 C2orf92A0A1B0GVN3 265 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 GLOD5A6NK44 160 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 SMIM23A6NLE4 172 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 TP53I11O14683 189 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 UGDHO60701 494 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 AIFM1O95831 613 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 RBP1P09455 135 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 FAM58BPP0C7Q3 252 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 HOXB4P17483 251 aaPredicted RBP18.22■□□□□ 0.51
NELFE-212ENST00000492539 DNASE1P24855 282 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 ZNF136P52737 540 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 WNT3P56703 355 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 FBXW4P57775 412 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 PHEXP78562 749 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 DAZAP2Q15038 168 aaPredicted RBP18.22■□□□□ 0.51
NELFE-212ENST00000492539 FNDC7Q5VTL7 733 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 BICRALQ6AI39 1079 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 MYLK4Q86YV6 388 aaPredicted RBP18.22■□□□□ 0.51
NELFE-212ENST00000492539 RIBC1Q8N443 379 aaPredicted RBP18.22■□□□□ 0.51
NELFE-212ENST00000492539 OR2W6PQ8NHA6 318 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 WDR20Q8TBZ3 569 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 SPPL2AQ8TCT8 520 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 UCN3Q969E3 161 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 NTNG2Q96CW9 530 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 ALPK1Q96QP1 1244 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 SECISBP2Q96T21 854 aaKnown RBP18.22■□□□□ 0.51
NELFE-212ENST00000492539 ANGPTL4Q9BY76 406 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 ACTR8Q9H981 624 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 PLEKHA6Q9Y2H5 1048 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 ANGPTL3Q9Y5C1 460 aa18.22■□□□□ 0.51
NELFE-212ENST00000492539 A0A1W2PS29 197 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 CAPN14A8MX76 684 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 SNX4O95219 450 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 SSTR4P31391 388 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 CDK9P50750 372 aaKnown RBP18.21■□□□□ 0.51
NELFE-212ENST00000492539 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 FUT7Q11130 342 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 NHSL2Q5HYW2 709 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 NSUN5P2Q63ZY6 315 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 CYP20A1Q6UW02 462 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 TMEM64Q6YI46 380 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 NUDT13Q86X67 352 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 PM20D2Q8IYS1 436 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 GOT1L1Q8NHS2 421 aaPredicted RBP18.21■□□□□ 0.51
NELFE-212ENST00000492539 REPS1Q96D71 796 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 MBD6Q96DN6 1003 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 HSPBAP1Q96EW2 488 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 RILPQ96NA2 401 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 ROPN1BQ9BZX4 212 aaPredicted RBP18.21■□□□□ 0.51
NELFE-212ENST00000492539 WDR41Q9HAD4 459 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 CXorf21Q9HAI6 301 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 ROPN1Q9HAT0 212 aaPredicted RBP18.21■□□□□ 0.51
NELFE-212ENST00000492539 DLL4Q9NR61 685 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 XPR1Q9UBH6 696 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 EDARQ9UNE0 448 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 C15orf41Q9Y2V0 281 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 NPFFR2Q9Y5X5 522 aa18.21■□□□□ 0.51
NELFE-212ENST00000492539 IL2RAP01589 272 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 CT62P0C5K7 136 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 KRT15P19012 456 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 TACR1P25103 407 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 TMED10P49755 219 aaKnown RBP18.2■□□□□ 0.5
NELFE-212ENST00000492539 FOXD4Q12950 439 aaPredicted RBP18.2■□□□□ 0.5
NELFE-212ENST00000492539 PCBP2Q15366 365 aaKnown RBP eCLIP18.2■□□□□ 0.5
NELFE-212ENST00000492539 VASNQ6EMK4 673 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 OR52E8Q6IFG1 317 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 PAMR1Q6UXH9 720 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 GALNT12Q8IXK2 581 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 ZNF615Q8N8J6 731 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 L3MBTL4Q8NA19 623 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 ADIPOR1Q96A54 375 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 MRPL57Q9BQC6 102 aaKnown RBP18.2■□□□□ 0.5
NELFE-212ENST00000492539 MRPL46Q9H2W6 279 aaKnown RBP18.2■□□□□ 0.5
NELFE-212ENST00000492539 TMCO1Q9UM00 188 aa18.2■□□□□ 0.5
NELFE-212ENST00000492539 A0A1W2PPM1 405 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 MBD3L4A6NDZ8 208 aaPredicted RBP18.19■□□□□ 0.5
NELFE-212ENST00000492539 MBD3L3A6NE82 208 aaPredicted RBP18.19■□□□□ 0.5
NELFE-212ENST00000492539 LRRC14BA6NHZ5 514 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 MBD3L5A6NJ08 208 aaPredicted RBP18.19■□□□□ 0.5
NELFE-212ENST00000492539 GOLGA8RI6L899 631 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
NELFE-212ENST00000492539 TRAPPC6AO75865 159 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 GSTA1P08263 222 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 PYGBP11216 843 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 GFAPP14136 432 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 CASP3P42574 277 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 ALDH18A1P54886 795 aaKnown RBP18.19■□□□□ 0.5
NELFE-212ENST00000492539 GTF2H2Q13888 395 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 SF3B4Q15427 424 aaKnown RBP eCLIP18.19■□□□□ 0.5
NELFE-212ENST00000492539 CPSF6Q16630 551 aaKnown RBP eCLIP18.19■□□□□ 0.5
NELFE-212ENST00000492539 PFKFB4Q16877 469 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 GTF2H2CQ6P1K8 395 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 GOLGA7Q7Z5G4 137 aa18.19■□□□□ 0.5
NELFE-212ENST00000492539 CAMKMTQ7Z624 323 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms