RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 MS4A12Q9NXJ0 267 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 CD274Q9NZQ7 290 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 EIF3LQ9Y262 564 aaKnown RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
USF1-206ENST00000491629 CXorf49A8MYA2 514 aaPredicted RBP12□□□□□ -0.49
USF1-206ENST00000491629 SNPHO15079 494 aa12□□□□□ -0.49
USF1-206ENST00000491629 OR10H2O60403 315 aa12□□□□□ -0.49
USF1-206ENST00000491629 TGM6O95932 706 aa12□□□□□ -0.49
USF1-206ENST00000491629 SLC35E2BP0CK96 405 aa12□□□□□ -0.49
USF1-206ENST00000491629 SLC35E2P0CK97 266 aa12□□□□□ -0.49
USF1-206ENST00000491629 GPX3P22352 226 aa12□□□□□ -0.49
USF1-206ENST00000491629 MC3RP41968 323 aa12□□□□□ -0.49
USF1-206ENST00000491629 LHX2P50458 406 aa12□□□□□ -0.49
USF1-206ENST00000491629 GFRA1P56159 465 aa12□□□□□ -0.49
USF1-206ENST00000491629 SRYQ05066 204 aa12□□□□□ -0.49
USF1-206ENST00000491629 DDX39BQ13838 428 aaKnown RBP12□□□□□ -0.49
USF1-206ENST00000491629 RCAN2Q14206 197 aa12□□□□□ -0.49
USF1-206ENST00000491629 TMEM81Q6P7N7 255 aa12□□□□□ -0.49
USF1-206ENST00000491629 ZNF474Q6S9Z5 364 aaPredicted RBP12□□□□□ -0.49
USF1-206ENST00000491629 TRIM42Q8IWZ5 723 aa12□□□□□ -0.49
USF1-206ENST00000491629 WDSUB1Q8N9V3 476 aa12□□□□□ -0.49
USF1-206ENST00000491629 C7orf57Q8NEG2 295 aa12□□□□□ -0.49
USF1-206ENST00000491629 OR1J4Q8NGS1 313 aa12□□□□□ -0.49
USF1-206ENST00000491629 EXT2Q93063 718 aa12□□□□□ -0.49
USF1-206ENST00000491629 WNT2BQ93097 391 aa12□□□□□ -0.49
USF1-206ENST00000491629 STARD4Q96DR4 205 aa12□□□□□ -0.49
USF1-206ENST00000491629 PIK3IP1Q96FE7 263 aa12□□□□□ -0.49
USF1-206ENST00000491629 ZFP3Q96NJ6 502 aa12□□□□□ -0.49
USF1-206ENST00000491629 MTERF1Q99551 399 aaKnown RBP12□□□□□ -0.49
USF1-206ENST00000491629 TM9SF2Q99805 663 aa12□□□□□ -0.49
USF1-206ENST00000491629 PELOQ9BRX2 385 aaKnown RBP12□□□□□ -0.49
USF1-206ENST00000491629 OR2B2Q9GZK3 357 aa12□□□□□ -0.49
USF1-206ENST00000491629 OR10A5Q9H207 317 aa12□□□□□ -0.49
USF1-206ENST00000491629 UBTD1Q9HAC8 227 aa12□□□□□ -0.49
USF1-206ENST00000491629 SERHLQ9NQF3 203 aa12□□□□□ -0.49
USF1-206ENST00000491629 KLHL28Q9NXS3 571 aa12□□□□□ -0.49
USF1-206ENST00000491629 JRKLQ9Y4A0 524 aa12□□□□□ -0.49
USF1-206ENST00000491629 FREM1Q5H8C1 2179 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 A0A1W2PNV4 684 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CASKO14936 926 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 ICOSLGO75144 302 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CRLF1O75462 422 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
USF1-206ENST00000491629 NR2F6P10588 404 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 NID1P14543 1247 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CRYGSP22914 178 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 TLX1P31314 330 aaPredicted RBP11.99□□□□□ -0.49
USF1-206ENST00000491629 CPOXP36551 454 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CLDN18P56856 261 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 RPS13P62277 151 aaKnown RBP11.99□□□□□ -0.49
USF1-206ENST00000491629 PPP2R2BQ00005 443 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 POU4F1Q01851 419 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 MGAT2Q10469 447 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 NNATQ16517 81 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 GRHL2Q6ISB3 625 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 LRRC70Q7Z2Q7 622 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 FBXO36Q8NEA4 188 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 UBTD2Q8WUN7 234 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 LRRC39Q96DD0 335 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 OSBPL9Q96SU4 736 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CCL19Q99731 98 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 PIGMQ9H3S5 423 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 DDX31Q9H8H2 851 aaKnown RBP11.99□□□□□ -0.49
USF1-206ENST00000491629 HEY2Q9UBP5 337 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 NDRG3Q9UGV2 375 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 PACSIN3Q9UKS6 424 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 MAPRE3Q9UPY8 281 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 PPP2R2CQ9Y2T4 447 aa11.99□□□□□ -0.49
USF1-206ENST00000491629 CADP27708 2225 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 C17orf51A8MQB3 221 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 CAPN14A8MX76 684 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 E7ESA3 106 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 H0Y3Z8 333 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 PLOD2O00469 737 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 HCRTR2O43614 444 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 PPM1BO75688 479 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 GBAP04062 536 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 FAM58BPP0C7Q3 252 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 BUD31P41223 144 aaPredicted RBP11.98□□□□□ -0.49
USF1-206ENST00000491629 PIK3CBP42338 1070 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 PTH2RP49190 550 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 RAP1GDS1P52306 607 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 CBLBQ13191 982 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 SETDB1Q15047 1291 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
USF1-206ENST00000491629 ISCA2Q86U28 154 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 RDH11Q8TC12 318 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 UBE2E3Q969T4 207 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 ATOH8Q96SQ7 321 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
USF1-206ENST00000491629 GSX2Q9BZM3 304 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 METTL7AQ9H8H3 244 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 EHD3Q9NZN3 535 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
USF1-206ENST00000491629 EXO1Q9UQ84 846 aaKnown RBP11.98□□□□□ -0.49
USF1-206ENST00000491629 TSC22D4Q9Y3Q8 395 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms