RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ANKZF1Q9H8Y5 726 aa28.83■■■□□ 2.21
LDB1-204ENST00000490751 PNPLA3Q9NST1 481 aa28.83■■■□□ 2.21
LDB1-204ENST00000490751 COQ3Q9NZJ6 369 aa28.83■■■□□ 2.21
LDB1-204ENST00000490751 ZNF639Q9UID6 485 aa28.83■■■□□ 2.21
LDB1-204ENST00000490751 COPEO14579 308 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 BCKDKO14874 412 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 CDH16O75309 829 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 RFPL3SP0C7P2 107 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 TIA1P31483 386 aaKnown RBP eCLIP28.82■■■□□ 2.2
LDB1-204ENST00000490751 SOX18P35713 384 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 MAN2A2P49641 1150 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 NAA20P61599 178 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 BTKQ06187 659 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 DUSP8Q13202 625 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 LTB4RQ15722 352 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 FRMD7Q6ZUT3 714 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 RPRMLQ8N4K4 120 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 CCDC63Q8NA47 563 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 OR5M9Q8NGP3 310 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 JSRP1Q96MG2 331 aaPredicted RBP28.82■■■□□ 2.2
LDB1-204ENST00000490751 EBPLQ9BY08 206 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 NXF5Q9H1B4 397 aaKnown RBP28.82■■■□□ 2.2
LDB1-204ENST00000490751 PFDN4Q9NQP4 134 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 TNFRSF10DQ9UBN6 386 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 CFL2Q9Y281 166 aa28.82■■■□□ 2.2
LDB1-204ENST00000490751 PHF3Q92576 2039 aaKnown RBP28.81■■■□□ 2.2
LDB1-204ENST00000490751 SERTM1A2A2V5 107 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 C19orf84I3L1E1 186 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 AQP7O14520 342 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 SUSD5O60279 629 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 DRD2P14416 443 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 NNATQ16517 81 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 TBCELQ5QJ74 424 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 MCEMP1Q8IX19 187 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 C4orf33Q8N1A6 199 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 SIMC1Q8NDZ2 872 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 RDH11Q8TC12 318 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 SPPL2AQ8TCT8 520 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 C16orf78Q8WTQ4 265 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 CTHRC1Q96CG8 243 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 ITPAQ9BY32 194 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 EXO5Q9H790 373 aa28.81■■■□□ 2.2
LDB1-204ENST00000490751 ANKRD33BA6NCL7 494 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 CBX7O95931 251 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 SNRPB2P08579 225 aaKnown RBP28.8■■■□□ 2.2
LDB1-204ENST00000490751 COX6B1P14854 86 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 KRT4P19013 534 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 DNAJB13P59910 316 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 TRMT12Q53H54 448 aaKnown RBP28.8■■■□□ 2.2
LDB1-204ENST00000490751 CFAP157Q5JU67 520 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 BICRALQ6AI39 1079 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 GALNT18Q6P9A2 607 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 CA5BP1Q8WTZ4 195 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 EXOSC8Q96B26 276 aaKnown RBP28.8■■■□□ 2.2
LDB1-204ENST00000490751 C11orf24Q96F05 449 aaPredicted RBP28.8■■■□□ 2.2
LDB1-204ENST00000490751 ZNF597Q96LX8 424 aa28.8■■■□□ 2.2
LDB1-204ENST00000490751 TRGV5A0A0B4J1U4 118 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 HCN1O60741 890 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 CPA3P15088 417 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 PCSK2P16519 638 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 ABCD3P28288 659 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 MRPS35P82673 323 aaKnown RBP28.79■■■□□ 2.2
LDB1-204ENST00000490751 HEPACAMQ14CZ8 416 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 SPDYAQ5MJ70 313 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 OR52R1Q8NGF1 315 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 SECISBP2Q96T21 854 aaKnown RBP28.79■■■□□ 2.2
LDB1-204ENST00000490751 OXSMQ9NWU1 459 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 B4GALT7Q9UBV7 327 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 PLLPQ9Y342 182 aa28.79■■■□□ 2.2
LDB1-204ENST00000490751 H3BQF6 201 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 TRIM3O75382 744 aaPredicted RBP28.78■■■□□ 2.2
LDB1-204ENST00000490751 CRCPO75575 148 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 ANXA4P09525 319 aaPredicted RBP28.78■■■□□ 2.2
LDB1-204ENST00000490751 SLC18A2Q05940 514 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 IMPG1Q17R60 797 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 TMEM198Q66K66 360 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 ZNF585AQ6P3V2 769 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 CCDC116Q8IYX3 515 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 OR2W6PQ8NHA6 318 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 RND1Q92730 232 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 SARAFQ96BY9 339 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 RILPQ96NA2 401 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 SIRT5Q9NXA8 310 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 QPCTLQ9NXS2 382 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 SPRR3Q9UBC9 169 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 ACAD8Q9UKU7 415 aa28.78■■■□□ 2.2
LDB1-204ENST00000490751 FIGNL2A6NMB9 653 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 ENDOUP21128 410 aaKnown RBP28.77■■■□□ 2.2
LDB1-204ENST00000490751 ACVR2AP27037 513 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 RPP38P78345 283 aaKnown RBP28.77■■■□□ 2.2
LDB1-204ENST00000490751 ZNF628Q5EBL2 1059 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 ZNF675Q8TD23 568 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 LCORQ96JN0 433 aaPredicted RBP28.77■■■□□ 2.2
LDB1-204ENST00000490751 ANGPTL4Q9BY76 406 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 SHCBP1LQ9BZQ2 653 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 TNFRSF12AQ9NP84 129 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 GIMAP4Q9NUV9 329 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 PRODH2Q9UF12 536 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 RNF6Q9Y252 685 aa28.77■■■□□ 2.2
LDB1-204ENST00000490751 PKDREJQ9NTG1 2253 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms