RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CYLC2Q14093 348 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SHROOM1Q2M3G4 852 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 KRT71Q3SY84 523 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 RABL6Q3YEC7 729 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 MPPE1Q53F39 396 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 BOLA3Q53S33 107 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 HSP90AB3PQ58FF7 597 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 B3GLCTQ6Y288 498 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 WDR49Q8IV35 697 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 STHQ8IWL8 128 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 PARP8Q8N3A8 854 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 FGFRL1Q8N441 504 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SFRP1Q8N474 314 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SPEM1Q8N4L4 309 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 URGCPQ8TCY9 931 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 AGAP11Q8TF27 550 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 ITLN1Q8WWA0 313 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 GIMAP1Q8WWP7 306 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 C5orf30Q96GV9 206 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 RPGRIP1Q96KN7 1286 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 FAM213AQ9BRX8 229 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 FUNDC2Q9BWH2 189 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 TSPYL1Q9H0U9 437 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC26A1Q9H2B4 701 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 CUTCQ9NTM9 273 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 ACOXLQ9NUZ1 547 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 CYP39A1Q9NYL5 469 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 TECRQ9NZ01 308 aaKnown RBP3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 FER1L5A0AVI2 2057 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC9B1P1A6NJY1 282 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 MEI4A8MW99 385 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 LRRTM2O43300 516 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 PRDM1O75626 825 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 ADCY5O95622 1261 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 PDGFBP01127 241 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 FCGR3AP08637 254 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 CYP3A5P20815 502 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 SSR1P43307 286 aaKnown RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 MAGEA4P43358 317 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 MTIF2P46199 727 aaKnown RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 PRELPP51888 382 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 GALK2Q01415 458 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC25A24Q6NUK1 477 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 MARCH9Q86YJ5 346 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 HIPK1Q86Z02 1210 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCDC71Q8IV32 467 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 GPD1LQ8N335 351 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNRF1Q8ND25 227 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 OR4L1Q8NH43 312 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 OR4A16Q8NH70 328 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF75CPQ92670 426 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 BCL2L2Q92843 193 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 TUBGCP3Q96CW5 907 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 KCNK16Q96T55 309 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 CXXC4Q9H2H0 198 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 PNPLA3Q9NST1 481 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 DDX28Q9NUL7 540 aaKnown RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 TAS2R16Q9NYV7 291 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF581Q9P0T4 197 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 SEC14L4Q9UDX3 406 aa3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 CAB39Q9Y376 341 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P38-201ENST00000490557 SH3PXD2BA1X283 911 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 FOXI3A8MTJ6 420 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC28A1O00337 649 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 EEF2KO00418 725 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 RASGRF2O14827 1237 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 SEMA4FO95754 770 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 HCKP08631 526 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 MMP10P09238 476 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 TSPY4P0CV99 314 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 TSPY10P0CW01 314 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 FOSL2P15408 326 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF18P17022 549 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 DEKP35659 375 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 NSFP46459 744 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC7A2P52569 658 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 ACTR1AP61163 376 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 GFPT1Q06210 699 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 GK2Q14410 553 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 HSP90B2PQ58FF3 399 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 MFSD7Q6UXD7 560 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 RBM43Q6ZSC3 357 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 EEF2KMTQ96G04 330 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC25A19Q9HC21 320 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 SYTL2Q9HCH5 934 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 ABCC13Q9NSE7 274 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 AIPL1Q9NZN9 384 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 VPS54Q9P1Q0 977 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 ERVK-18Q9QC07 812 aa3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 PTBP2Q9UKA9 531 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 TDRKHQ9Y2W6 561 aaKnown RBP3.81□□□□□ -1.8
HMGB1P38-201ENST00000490557 A0A087WWV3 80 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF840PA6NDX5 716 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 K7ERI5 159 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms