RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CDR2Q01850 454 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 FCHO2Q0JRZ9 810 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 KLRB1Q12918 225 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 GPR17Q13304 367 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 HFEQ30201 348 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 HLA-BQ31612 363 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 GPR33Q49SQ1 333 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 C14orf28Q4W4Y0 310 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 ZNF542PQ5EBM4 170 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 CELF3Q5SZQ8 465 aaKnown RBP4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 LCN1P1Q5VSP4 162 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 SIGLEC15Q6ZMC9 328 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 SLC26A9Q7LBE3 791 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 ECHDC2Q86YB7 292 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 SIAH3Q8IW03 269 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 KLHDC8AQ8IYD2 350 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 STPG4Q8N801 248 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 AMER3Q8N944 861 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 OR4C15Q8NGM1 316 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 FCAMRQ8WWV6 532 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 BCL2L2Q92843 193 aaPredicted RBP4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 DYNLL2Q96FJ2 89 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 MARK4Q96L34 752 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 TSSK2Q96PF2 358 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 C17orf62Q9BQA9 187 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 P2RY12Q9H244 342 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 DNAJC11Q9NVH1 559 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 FETUBQ9UGM5 382 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 ACAD8Q9UKU7 415 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 GINS2Q9Y248 185 aa4.32□□□□□ -1.72
SSX2IP-208ENST00000490476 VWFP04275 2813 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 LRP4O75096 1905 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 COL27A1Q8IZC6 1860 aaPredicted RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 FANCIQ9NVI1 1328 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 PRSS44E7EML9 344 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 CACNB4O00305 520 aaPredicted RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 SLC22A2O15244 555 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 VEGFDO43915 354 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ACSL4O60488 711 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 FRMD6-AS1P0C7T7 363 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 CPA3P15088 417 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 DUSP3P51452 185 aaPredicted RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ERVFC1-1P60608 527 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ARL16Q0P5N6 197 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 CETN1Q12798 172 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 RBM39Q14498 530 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 STXBP2Q15833 593 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ARHGEF16Q5VV41 709 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ETFRF1Q6IPR1 90 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 RBMS3Q6XE24 437 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 MARK2Q7KZI7 788 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 SERPINA12Q8IW75 414 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 CHDHQ8NE62 594 aaPredicted RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 OR7A2PQ8NGA2 310 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 OR4C3Q8NH37 302 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 RNASE8Q8TDE3 154 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 HTR3CQ8WXA8 447 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 TM9SF4Q92544 642 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 FAM46BQ96A09 425 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 C5orf30Q96GV9 206 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 RBM41Q96IZ5 413 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 TMEM237Q96Q45 408 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 EPYCQ99645 322 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ALKBH7Q9BT30 221 aaPredicted RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 NACAP1Q9BZK3 213 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 PPANQ9NQ55 473 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 INTS9Q9NV88 658 aaKnown RBP4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 TBC1D13Q9NVG8 400 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 SLC12A6Q9UHW9 1150 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 ODF2LQ9ULJ1 636 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 COLEC10Q9Y6Z7 277 aa4.31□□□□□ -1.72
SSX2IP-208ENST00000490476 TENM1Q9UKZ4 2725 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 A0A0B4J203 849 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 NPIPA3F8WFD2 350 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 TRDMT1O14717 391 aaKnown RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 EPHB6O15197 1021 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 FGF17O60258 216 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 F7P08709 466 aaPredicted RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 RBMS1P29558 406 aaKnown RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 DNA2P51530 1060 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 UCP2P55851 309 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 GALK2Q01415 458 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 SRSF6Q13247 344 aaKnown RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 ACKR1Q16570 336 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 ACCSLQ4AC99 568 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 ZC2HC1CQ53FD0 456 aaPredicted RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 UGT3A1Q6NUS8 523 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 ZNF771Q7L3S4 317 aaPredicted RBP4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 SLC16A9Q7RTY1 509 aa4.3□□□□□ -1.72
SSX2IP-208ENST00000490476 TRPT1Q86TN4 253 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms