RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PSMB1P20618 241 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 PTGDSP41222 190 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 RPS13P62277 151 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 IGLV3-21P80748 117 aaPredicted RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 IRF9Q00978 393 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 DHX9Q08211 1270 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 NR1I3Q14994 352 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 PON3Q15166 354 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 TSC22D1Q15714 1073 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 ASTE1Q2TB18 679 aaPredicted RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 UGT3A1Q6NUS8 523 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 ZNF549Q6P9A3 640 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 BEND4Q6ZU67 534 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 STEAP2Q8NFT2 490 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 OR6K3Q8NGY3 331 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 MFSD3Q96ES6 412 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 NODALQ96S42 347 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 REXO4Q9GZR2 422 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 WBP11Q9Y2W2 641 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 EMC9Q9Y3B6 208 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 DYRK1BQ9Y463 629 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 SNX8Q9Y5X2 465 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 ESYT3A0FGR9 886 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 OR6C76A6NM76 312 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 TNFRSF21O75509 655 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 C8GP07360 202 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
UFD1-209ENST00000489406 RHOXF2BP0C7M4 288 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 PEPDP12955 493 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 ADH6P28332 368 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 SRD5A2P31213 254 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 TTKP33981 857 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 EFNA4P52798 201 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 SUCLG1P53597 346 aaKnown RBP13.41□□□□□ -0.26
UFD1-209ENST00000489406 NRG3P56975 720 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 EEF1AKMT1Q8WVE0 214 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 MRPL24Q96A35 216 aaKnown RBP13.41□□□□□ -0.26
UFD1-209ENST00000489406 PKP2Q99959 881 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 PIMREGQ9BSJ6 248 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 KLRF1Q9NZS2 232 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
UFD1-209ENST00000489406 SEC14L5O43304 696 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 AKR1B10O60218 316 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 AQP8O94778 261 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
UFD1-209ENST00000489406 CLPSP04118 112 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 KRT15P19012 456 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 OGNP20774 298 aaKnown RBP13.4□□□□□ -0.26
UFD1-209ENST00000489406 PDLIM4P50479 330 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 FIGNL1Q6PIW4 674 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
UFD1-209ENST00000489406 FOLH1BQ9HBA9 442 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 PRDM7Q9NQW5 492 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 DKKL1Q9UK85 242 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 FBXL2Q9UKC9 423 aa13.4□□□□□ -0.26
UFD1-209ENST00000489406 H7C417 338 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 TJP3O95049 919 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 ALOX15P16050 662 aaPredicted RBP13.39□□□□□ -0.27
UFD1-209ENST00000489406 ZNF23P17027 643 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
UFD1-209ENST00000489406 ABCD3P28288 659 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
UFD1-209ENST00000489406 CTBP2P56545 445 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 EEFSECP57772 596 aaKnown RBP13.39□□□□□ -0.27
UFD1-209ENST00000489406 HILS1P60008 231 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 SP140Q13342 867 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 STX1AQ16623 288 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 PLCZ1Q86YW0 608 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 KCTD4Q8WVF5 259 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 HSD17B8Q92506 261 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 FOXN4Q96NZ1 517 aa13.39□□□□□ -0.27
UFD1-209ENST00000489406 INTS10Q9NVR2 710 aaKnown RBP13.39□□□□□ -0.27
UFD1-209ENST00000489406 EXPH5Q8NEV8 1989 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 NDUFS8O00217 210 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 SMAD9O15198 467 aaKnown RBP13.38□□□□□ -0.27
UFD1-209ENST00000489406 ZIC3O60481 467 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 GUCA1CO95843 209 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 PLGP00747 810 aaPredicted RBP13.38□□□□□ -0.27
UFD1-209ENST00000489406 CPN2P22792 545 aa13.38□□□□□ -0.27
UFD1-209ENST00000489406 CNTFP26441 200 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms