RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PNO1Q9NRX1 252 aaKnown RBP9.37□□□□□ -0.91
USP11-211ENST00000489111 CCM2LQ9NUG4 571 aaPredicted RBP9.37□□□□□ -0.91
USP11-211ENST00000489111 DCAF13Q9NV06 445 aaKnown RBP9.37□□□□□ -0.91
USP11-211ENST00000489111 OLAHQ9NV23 265 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 EXD2Q9NVH0 621 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 ARMC1Q9NVT9 282 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 C6orf203Q9P0P8 240 aaPredicted RBP9.37□□□□□ -0.91
USP11-211ENST00000489111 GPN3Q9UHW5 284 aaPredicted RBP9.37□□□□□ -0.91
USP11-211ENST00000489111 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 ZNF451Q9Y4E5 1061 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
USP11-211ENST00000489111 IGKV3D-11A0A0A0MRZ8 115 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 DUXAA6NLW8 204 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 MEN1O00255 615 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 HNRNPRO43390 633 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 TPST1O60507 370 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 PRAMEF2O60811 474 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 SNRNP200O75643 2136 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 PDE9AO76083 593 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 PRKD3O94806 890 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 MT-CO3P00414 261 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 KLK3P07288 261 aaPredicted RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 HEXBP07686 556 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ALOX5P09917 674 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 RAP2AP10114 183 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 TGM1P22735 817 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 GALNSP34059 522 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CRISP3P54108 245 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 RHAGQ02094 409 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 EIF3IQ13347 325 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 ELOAQ14241 798 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 ZNF267Q14586 743 aaPredicted RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 EXOSC7Q15024 291 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 TRIP10Q15642 601 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 NSDHLQ15738 373 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ISXQ2M1V0 245 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 TRMT12Q53H54 448 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 VWA2Q5GFL6 755 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 HES3Q5TGS1 186 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CDCP2Q5VXM1 449 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CDC73Q6P1J9 531 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ENPP6Q6UWR7 440 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 DHRS13Q6UX07 377 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 COX15Q7KZN9 410 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 RAB11FIP2Q7L804 512 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 GLRX5Q86SX6 157 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CDRT4Q8N9R6 151 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 SLC38A9Q8NBW4 561 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 DEFB124Q8NES8 71 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 OR52R1Q8NGF1 315 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 STT3BQ8TCJ2 826 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 DOK4Q8TEW6 326 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 SLC38A5Q8WUX1 472 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 LZICQ8WZA0 190 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 SLC9A6Q92581 669 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 TSLPQ969D9 159 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 FKBP10Q96AY3 582 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 SLCO4A1Q96BD0 722 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 OTUB1Q96FW1 271 aaPredicted RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 C16orf58Q96GQ5 468 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 TMEM19Q96HH6 336 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 OR7D2Q96RA2 312 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ZNF607Q96SK3 696 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ZPBPQ9BS86 351 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 VN1R1Q9GZP7 353 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 VCX3BQ9H321 246 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 MAGIXQ9H6Y5 334 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ANKRA2Q9H9E1 313 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CALML5Q9NZT1 146 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 PISDQ9UG56 409 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 NXT1Q9UKK6 140 aaKnown RBP9.36□□□□□ -0.91
USP11-211ENST00000489111 LIPT1Q9Y234 373 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 PCDHGB3Q9Y5G1 929 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 ADAMTS9Q9P2N4 1935 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 LAMA1P25391 3075 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 CABIN1Q9Y6J0 2220 aa9.36□□□□□ -0.91
USP11-211ENST00000489111 IGLV3-12A0A075B6K2 115 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 OR2W5A6NFC9 320 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 C17orf105B2RV13 164 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 PLD2O14939 933 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 SUV39H1O43463 412 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TIPRLO75663 272 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 TFPTP0C1Z6 253 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CT62P0C5K7 136 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 ZGLP1P0C6A0 271 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 FASP25445 335 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 RORAP35398 523 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CLCN2P51788 898 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 CLDN6P56747 220 aa9.35□□□□□ -0.91
USP11-211ENST00000489111 EEF1A2Q05639 463 aaKnown RBP9.35□□□□□ -0.91
USP11-211ENST00000489111 MGAT2Q10469 447 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms