RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CFAP36Q96G28 342 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 NAT9Q9BTE0 207 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 RBSNQ9H1K0 784 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 GALNT9Q9HCQ5 603 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 ADGRE2Q9UHX3 823 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 MAPRE3Q9UPY8 281 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 PSAT1Q9Y617 370 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 CR1P17927 2039 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 FAM95CA0A1B0GW59 222 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 A0A1W2PS29 197 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 C16orf97H3BN30 126 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 CDH16O75309 829 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 CT62P0C5K7 136 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 SLC35E2BP0CK96 405 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 SLC35E2P0CK97 266 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 POU2F1P14859 743 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 GALNSP34059 522 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 PTGDSP41222 190 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 LHX2P50458 406 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 GFRA1P56159 465 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 TBCCQ15814 346 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 SLC30A6Q6NXT4 461 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 MED27Q6P2C8 311 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 P4HA3Q7Z4N8 544 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 ZC3HC1Q86WB0 502 aaKnown RBP14.65□□□□□ -0.06
USP48-210ENST00000489108 ZNF615Q8N8J6 731 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 WDSUB1Q8N9V3 476 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 RGMAQ96B86 450 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 NODALQ96S42 347 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 OR2B2Q9GZK3 357 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 CXorf56Q9H5V9 222 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 CXorf21Q9HAI6 301 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 YAE1D1Q9NRH1 226 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 ELOVL5Q9NYP7 299 aa14.65□□□□□ -0.06
USP48-210ENST00000489108 EXO1Q9UQ84 846 aaKnown RBP14.65□□□□□ -0.06
USP48-210ENST00000489108 A0A1W2PR48 441 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 CCNT2O60583 730 aaKnown RBP14.64□□□□□ -0.07
USP48-210ENST00000489108 CBR3O75828 277 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 F12P00748 615 aaPredicted RBP14.64□□□□□ -0.07
USP48-210ENST00000489108 CRHP06850 196 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 KRT15P19012 456 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 BUD31P41223 144 aaPredicted RBP14.64□□□□□ -0.07
USP48-210ENST00000489108 KCNJ5P48544 419 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 RAP1GDS1P52306 607 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 CLDN18P56856 261 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 CLEC12BQ2HXU8 276 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 IFNEQ86WN2 208 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 GPSM1Q86YR5 675 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 LAS2Q8IYD9 372 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 ZCCHC7Q8N3Z6 543 aaKnown RBP14.64□□□□□ -0.07
USP48-210ENST00000489108 OR7G3Q8NG95 312 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 HGDQ93099 445 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 MS4A14Q96JA4 679 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 SLC39A3Q9BRY0 314 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 NXF5Q9H1B4 397 aaKnown RBP14.64□□□□□ -0.07
USP48-210ENST00000489108 OR10A5Q9H207 317 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 ACTR8Q9H981 624 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 TAS2R10Q9NYW0 307 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 ASB4Q9Y574 426 aa14.64□□□□□ -0.07
USP48-210ENST00000489108 LRRC14BA6NHZ5 514 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 PLPP1O14494 284 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 PHF1O43189 567 aaPredicted RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 HCRTR2O43614 444 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 PPM1BO75688 479 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 PLAUP00749 431 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 TP53P04637 393 aaPredicted RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 ELK3P41970 407 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 KIR2DL2P43627 348 aaPredicted RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 DDX39BQ13838 428 aaKnown RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 VEZF1Q14119 521 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 E2F2Q14209 437 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 MRM1Q6IN84 353 aaKnown RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 TMEM81Q6P7N7 255 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 SH2D5Q6ZV89 423 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 NUP54Q7Z3B4 507 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 UBE2E3Q969T4 207 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 OSBPL11Q9BXB4 747 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 REG4Q9BYZ8 158 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 DERL2Q9GZP9 239 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 LZTFL1Q9NQ48 299 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 CD274Q9NZQ7 290 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 HEY2Q9UBP5 337 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 PTBP2Q9UKA9 531 aaKnown RBP14.63□□□□□ -0.07
USP48-210ENST00000489108 RNF112Q9ULX5 631 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 DTX4Q9Y2E6 619 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 DLGAP4Q9Y2H0 992 aa14.63□□□□□ -0.07
USP48-210ENST00000489108 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.62□□□□□ -0.07
USP48-210ENST00000489108 KLF4O43474 513 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 TLX2O43763 284 aaPredicted RBP14.62□□□□□ -0.07
USP48-210ENST00000489108 TMPRSS11DO60235 418 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 EEDO75530 441 aaKnown RBP14.62□□□□□ -0.07
USP48-210ENST00000489108 THBDP07204 575 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 RHOXF2BP0C7M4 288 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 ZNF708P17019 499 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 NAGAP17050 411 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 SIRPAP78324 504 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 OR4D1Q15615 310 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 NNATQ16517 81 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 CYP1B1Q16678 543 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms