RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 JUNP05412 331 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 EDN3P14138 238 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PCSK2P16519 638 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PTGER1P34995 402 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 DCAF7P61962 342 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 MRPS35P82673 323 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 EMX2Q04743 252 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 EXOSC7Q15024 291 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF628Q5EBL2 1059 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF227Q86WZ6 799 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 GOLM1Q8NBJ4 401 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 POGLUT1Q8NBL1 392 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PSD4Q8NDX1 1056 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 C17orf47Q8NEP4 570 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 CLHC1Q8NHS4 586 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 ZFP28Q8NHY6 868 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 KAT2AQ92830 837 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF764Q96H86 408 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PRPF18Q99633 342 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 CLMPQ9H6B4 373 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 SH3BP4Q9P0V3 963 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 HELZ2Q9BYK8 2649 aaKnown RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ASPDHA6ND91 283 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 TRPC5OSA6NMA1 111 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 PEX1O43933 1283 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 PLOD3O60568 738 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 CBX7O95931 251 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 P04436 131 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 GNLYP22749 145 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 TMED10P49755 219 aaKnown RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ALDH6A1Q02252 535 aaKnown RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 MDGA2Q7Z553 956 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 LRRC34Q8IZ02 419 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ST6GALNAC3Q8NDV1 305 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 DYDC1Q8WWB3 177 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 NR4A3Q92570 626 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF75CPQ92670 426 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ADIPOR1Q96A54 375 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 SPACA9Q96E40 222 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ZBED6CLQ96FA7 236 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-207ENST00000488591 AMDHD1Q96NU7 426 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 GLIPR2Q9H4G4 154 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 AKTIPQ9H8T0 292 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 SACM1LQ9NTJ5 587 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 ATAD3AQ9NVI7 634 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 TAS2R9Q9NYW1 312 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 MAPRE3Q9UPY8 281 aa13.91□□□□□ -0.18
CXCL12-207ENST00000488591 A0A087WV62 115 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ANKUB1A6NFN9 424 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 TP53I11O14683 189 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ACOX3O15254 700 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 HDAC3O15379 428 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF354AO60765 605 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 COQ9O75208 318 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 CBX6O95503 412 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 NADKO95544 446 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 FBXO45P0C2W1 286 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 LBPP18428 481 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 CNR1P21554 472 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 DRD5P21918 477 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 GPX3P22352 226 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 GPC1P35052 558 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PPICP45877 212 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 MEOX1P50221 254 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 EMDP50402 254 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 MANFP55145 182 aaKnown RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PPP2R2AP63151 447 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PMP22Q01453 160 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PDE7AQ13946 482 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PRSS53Q2L4Q9 553 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF791Q3KP31 576 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 SLC22A10Q63ZE4 541 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF324BQ6AW86 544 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ANKRD26P1Q6NSI1 321 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 NATD1Q8N6N6 113 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 LRRC8CQ8TDW0 803 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 HSPBAP1Q96EW2 488 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 LCORQ96JN0 433 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-207ENST00000488591 SLX1AQ9BQ83 275 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 MEAF6Q9HAF1 191 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ASIC5Q9NY37 505 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 ATP6V1HQ9UI12 483 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 NPFFR2Q9Y5X5 522 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 SHANK1Q9Y566 2161 aa13.9□□□□□ -0.18
CXCL12-207ENST00000488591 PLOD2O00469 737 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 SCAMP2O15127 329 aaKnown RBP13.89□□□□□ -0.19
CXCL12-207ENST00000488591 KITP10721 976 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 G6PDP11413 515 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 NAGAP17050 411 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 SOX18P35713 384 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 MC3RP41968 323 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 PSPHP78330 225 aa13.89□□□□□ -0.19
CXCL12-207ENST00000488591 RPP38P78345 283 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms