RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 COA1Q9GZY4 146 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 TDRD3Q9H7E2 651 aaKnown RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 S100A14Q9HCY8 104 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 CHCHD3Q9NX63 227 aaKnown RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 UBQLN2Q9UHD9 624 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 NRBP1Q9UHY1 535 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 APC2O95996 2303 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 ROCK2O75116 1388 aaKnown RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 RFX7Q2KHR2 1363 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 PATJQ8NI35 1801 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 SPTBN1Q01082 2364 aaKnown RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 SPAG17Q6Q759 2223 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 CCSO14618 274 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 SIGLEC5O15389 551 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 KINO60870 393 aaKnown RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 SH3BGRLO75368 114 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 CRCPO75575 148 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 LETM1O95202 739 aaPredicted RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 C8orf89P0DMQ9 161 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 CYBAP13498 195 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 LMO2P25791 158 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 FOLH1Q04609 750 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 FASTKQ14296 549 aaKnown RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 ACKR1Q16570 336 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 C15orf32Q32M92 178 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TCEAL5Q5H9L2 206 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 ADCK1Q86TW2 530 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TRPV1Q8NER1 839 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 Q8NFD4 153 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 C11orf52Q96A22 123 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 SGF29Q96ES7 293 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TGS1Q96RS0 853 aaKnown RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 CCM2Q9BSQ5 444 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 LRRCC1Q9C099 1032 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 C5orf66Q9H5L9 145 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TUFT1Q9NNX1 390 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 THAP10Q9P2Z0 257 aaPredicted RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TRMT112Q9UI30 125 aaKnown RBP3.48□□□□□ -1.85
ITGB1-214ENST00000488427 FBXL5Q9UKA1 691 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 GTF3C4Q9UKN8 822 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 TP53TG3Q9ULZ0 132 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 MGAT4AQ9UM21 535 aa3.48□□□□□ -1.85
ITGB1-214ENST00000488427 URB1O60287 2271 aaKnown RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 NEDD4P46934 1319 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ABCA2Q9BZC7 2435 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ARHGEF33A8MVX0 844 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 RTCAO00442 366 aaKnown RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ANKRD34CP0C6C1 535 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 LBPP18428 481 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 GATA2P23769 480 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 IL4RP24394 825 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 KRT2P35908 639 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 CEACAM7Q14002 265 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 KRTAP21-3Q3LHN1 58 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ZNF789Q5FWF6 425 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 LRRC38Q5VT99 294 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 PLPP4Q5VZY2 271 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ZNF776Q68DI1 518 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 DCLRE1AQ6PJP8 1040 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 GPR142Q7Z601 462 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 NLRP14Q86W24 1093 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 LRRC49Q8IUZ0 686 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 TBC1D10CQ8IV04 446 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 SIAH3Q8IW03 269 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 UBALD2Q8IYN6 164 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 SLC43A2Q8N370 569 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 CERS5Q8N5B7 392 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 C4orf32Q8N8J7 132 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 PHOSPHO2Q8TCD6 241 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 SEPT8Q92599 483 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 CORO2AQ92828 525 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 RPGRIP1Q96KN7 1286 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ALKBH3Q96Q83 286 aaPredicted RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 PRMT1Q99873 361 aaKnown RBP3.47□□□□□ -1.85
ITGB1-214ENST00000488427 LRRC2Q9BYS8 371 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 RPS10P5Q9NQ39 176 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 MRGBPQ9NV56 204 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 THYN1Q9P016 225 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 PILRAQ9UKJ1 303 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 LAMA5O15230 3695 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 AHCTF1Q8WYP5 2266 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 MCM3APO60318 1980 aa3.47□□□□□ -1.85
ITGB1-214ENST00000488427 ITPR2Q14571 2701 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 SVILO95425 2214 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 SDK1Q7Z5N4 2213 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 CABIN1Q9Y6J0 2220 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 TRGV8A0A0C4DH27 118 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 ZNF732B4DXR9 585 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 LMO7DNF2Z398 122 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 GPRIN2O60269 458 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 SELENOFO60613 162 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 GALR3O60755 368 aaPredicted RBP3.46□□□□□ -1.86
ITGB1-214ENST00000488427 LRCH4O75427 683 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 SLU7O95391 586 aaKnown RBP3.46□□□□□ -1.86
ITGB1-214ENST00000488427 CD1DP15813 335 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 SLC1A6P48664 564 aa3.46□□□□□ -1.86
ITGB1-214ENST00000488427 CSRP3P50461 194 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms