RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 H3BNX3 289 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 RAB40ALP0C0E4 278 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 UQCRBP14927 111 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 PGDP52209 483 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 CASP9P55211 416 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 DNASE1L3Q13609 305 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 SERTAD2Q14140 314 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 TRIP10Q15642 601 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 ZNF628Q5EBL2 1059 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 LRIF1Q5T3J3 769 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 ANKRD37Q7Z713 158 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 RIT1Q92963 219 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 NXPE2Q96DL1 559 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 CXorf21Q9HAI6 301 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 NXT1Q9UKK6 140 aaKnown RBP15.76■□□□□ 0.11
NF1-211ENST00000487476 LAMA5O15230 3695 aa15.76■□□□□ 0.11
NF1-211ENST00000487476 CD82P27701 267 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 SOAT1P35610 550 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 TRPC1P48995 793 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 SRSF6Q13247 344 aaKnown RBP15.75■□□□□ 0.11
NF1-211ENST00000487476 MED21Q13503 144 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 SELPLGQ14242 412 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 ZFP28Q8NHY6 868 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 PSMA8Q8TAA3 256 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 ELP4Q96EB1 424 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 CGREF1Q99674 301 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 IKZF5Q9H5V7 419 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 MAT2BQ9NZL9 334 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 TRBV5-3A0A0A0MS03 114 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 TNNI3P19429 210 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 RPS15P62841 145 aaKnown RBP15.75■□□□□ 0.11
NF1-211ENST00000487476 EXOSC7Q15024 291 aaKnown RBP15.75■□□□□ 0.11
NF1-211ENST00000487476 CNPY1Q3B7I2 92 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 LIN52Q52LA3 116 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 ZNF321PQ8N8H1 164 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 PNPT1Q8TCS8 783 aaKnown RBP15.75■□□□□ 0.11
NF1-211ENST00000487476 METTL21AQ8WXB1 218 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 FAM120BQ96EK7 910 aaKnown RBP15.75■□□□□ 0.11
NF1-211ENST00000487476 NUP210LQ5VU65 1888 aa15.75■□□□□ 0.11
NF1-211ENST00000487476 C17orf105B2RV13 164 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 UPK1AO00322 258 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 CASQ2O14958 399 aaPredicted RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 ERN1O75460 977 aaKnown RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 S1PR1P21453 382 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 FOLR3P41439 243 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 CCT3P49368 545 aaKnown RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 OR4D2P58180 307 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 ZNF267Q14586 743 aaPredicted RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 TBC1D25Q3MII6 688 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 RABL3Q5HYI8 236 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 NANOGP8Q6NSW7 305 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 C8orf82Q6P1X6 216 aaPredicted RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 TMEM205Q6UW68 189 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 SZRD1Q7Z422 152 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 VASH2Q86V25 355 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 GALNT12Q8IXK2 581 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 SLC35A5Q9BS91 424 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 NANOGQ9H9S0 305 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 VPS4AQ9UN37 437 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 MSRB2Q9Y3D2 182 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 GSTT1P30711 240 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 SSTR4P31391 388 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 PRKAG1P54619 331 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 MTPNP58546 118 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 EEF1A2Q05639 463 aaKnown RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 LRRC74AQ0VAA2 488 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 FHL5Q5TD97 284 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 C10orf111Q8N326 155 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 ROPN1LQ96C74 230 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 CTHRC1Q96CG8 243 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 ZNF578Q96N58 590 aaPredicted RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 GPATCH1Q9BRR8 931 aaKnown RBP15.74■□□□□ 0.11
NF1-211ENST00000487476 CNPPD1Q9BV87 410 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 NEUROD4Q9HD90 331 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 GID8Q9NWU2 228 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 PACSIN3Q9UKS6 424 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 DMXL2Q8TDJ6 3036 aa15.74■□□□□ 0.11
NF1-211ENST00000487476 C21orf140B9A014 251 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 LIPCP11150 499 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 SLC6A2P23975 617 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
NF1-211ENST00000487476 PSME3P61289 254 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 MAP4K2Q12851 820 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 DUSP8Q13202 625 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 IL10RAQ13651 578 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 SPDYE7PQ495Y7 208 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 RUNDC3AQ59EK9 446 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 VWA5B2Q8N398 1253 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 ZFP90Q8TF47 636 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 WDR77Q9BQA1 342 aaPredicted RBP15.73■□□□□ 0.11
NF1-211ENST00000487476 GPR87Q9BY21 358 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 ADAP2Q9NPF8 381 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 GPATCH2Q9NW75 528 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 GMPR2Q9P2T1 348 aaKnown RBP15.73■□□□□ 0.11
NF1-211ENST00000487476 ERVK-19Q9WJR5 959 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 PADI2Q9Y2J8 665 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 HS3ST3B1Q9Y662 390 aa15.73■□□□□ 0.11
NF1-211ENST00000487476 RNF103-CHMP3A0A140T963 221 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms