RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 C17orf47Q8NEP4 570 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 TRPC4APQ8TEL6 797 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 ZNF483Q8TF39 744 aaPredicted RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 PAFAH2Q99487 392 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 MRPL57Q9BQC6 102 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 CDC42EP4Q9H3Q1 356 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 ELOVL6Q9H5J4 265 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 DNAJB12Q9NXW2 375 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 DMGDHQ9UI17 866 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 ZNF225Q9UK10 706 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SLC12A4Q9UP95 1085 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 DTX4Q9Y2E6 619 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 C15orf41Q9Y2V0 281 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SLC6A5Q9Y345 797 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 MTORP42345 2549 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 C1orf226A1L170 272 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 POC1B-GALNT4F8VUJ3 575 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 RPS17P08708 135 aaKnown RBP11.15□□□□□ -0.62
VPS16-208ENST00000487461 CD1EP15812 388 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 BMP7P18075 431 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 BMP5P22003 454 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 UQCRC1P31930 480 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 TIMP3P35625 211 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 MASP1P48740 699 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 SERPINB9P50453 376 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 IST1P53990 364 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 DUSP2Q05923 314 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 EXOSC7Q15024 291 aaKnown RBP11.15□□□□□ -0.62
VPS16-208ENST00000487461 TSNAXIP1Q2TAA8 658 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 TIGD3Q6B0B8 471 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 SLC48A1Q6P1K1 146 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 LETMD1Q6P1Q0 360 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 ADCY4Q8NFM4 1077 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 UHMK1Q8TAS1 419 aaKnown RBP11.15□□□□□ -0.62
VPS16-208ENST00000487461 DCAKDQ8WVC6 231 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 SELENOMQ8WWX9 145 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 WDYHV1Q96HA8 205 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 TMEM41AQ96HV5 264 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 UGT2B28Q9BY64 529 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 EPB41L4BQ9H329 900 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 LIME1Q9H400 295 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 CRIM1Q9NZV1 1036 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 MTRF1LQ9UGC7 380 aaKnown RBP11.15□□□□□ -0.62
VPS16-208ENST00000487461 BCAP29Q9UHQ4 241 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 ZNF639Q9UID6 485 aa11.15□□□□□ -0.62
VPS16-208ENST00000487461 FAM221AA4D161 298 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 A8MT66 165 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 TRIM49D1C9J1S8 452 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 GNB5O14775 395 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 GUCY1B2O75343 617 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ERAL1O75616 437 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 PPM1BO75688 479 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 CBX7O95931 251 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 OTCP00480 354 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ATP1B1P05026 303 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 NAGAP17050 411 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 KRT15P19012 456 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 CSNK2A2P19784 350 aaPredicted RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 PTPN6P29350 595 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 HSD17B3P37058 310 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 PTGDSP41222 190 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 TMED10P49755 219 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 ZNF136P52737 540 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 RPP38P78345 283 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 TOMM20Q15388 145 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 NNATQ16517 81 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 TRMT12Q53H54 448 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 NHSL2Q5HYW2 709 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 WIPI1Q5MNZ9 446 aaPredicted RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 DCST1Q5T197 706 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 C6orf163Q5TEZ5 329 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 NSUN5P2Q63ZY6 315 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 PM20D2Q8IYS1 436 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 VWA5B2Q8N398 1253 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 MMGT1Q8N4V1 131 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 IFT81Q8WYA0 676 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 RNASE6Q93091 150 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 HGDQ93099 445 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 CTHRC1Q96CG8 243 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ZNF681Q96N22 645 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 NODALQ96S42 347 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 ITPAQ9BY32 194 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 POLDIP3Q9BY77 421 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 BRINP2Q9C0B6 783 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 MRPL46Q9H2W6 279 aaKnown RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 BRF2Q9HAW0 419 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ZNF629Q9UEG4 869 aaPredicted RBP11.14□□□□□ -0.63
VPS16-208ENST00000487461 ZNF180Q9UJW8 692 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 SNX6Q9UNH7 406 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms