RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 TRAF6Q9Y4K3 522 aa20.64■□□□□ 0.89
CDHR3-212ENST00000487084 WDR91A4D1P6 747 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 WIPF3A6NGB9 483 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CCL21O00585 134 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 ZG16O60844 167 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 ERLIN1O75477 346 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 PDE9AO76083 593 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CBX7O95931 251 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 MYZAPP0CAP1 466 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 GP1BBP13224 206 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CA7P43166 264 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 ETV4P43268 484 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 RPL38P63173 70 aaKnown RBP20.63■□□□□ 0.89
CDHR3-212ENST00000487084 DUSP8Q13202 625 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 GALNTL6Q49A17 601 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 ZNF628Q5EBL2 1059 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CMPK2Q5EBM0 449 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 FAM71E1Q6IPT2 247 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 SLC22A16Q86VW1 577 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 SPPL2CQ8IUH8 684 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 FAM9CQ8IZT9 166 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CLYBLQ8N0X4 340 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 PAQR8Q8TEZ7 354 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 RELTQ969Z4 430 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CTHRC1Q96CG8 243 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 DEFB127Q9H1M4 99 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 SUCOQ9UBS9 1254 aaKnown RBP20.63■□□□□ 0.89
CDHR3-212ENST00000487084 PLEKHB1Q9UF11 243 aaPredicted RBP20.63■□□□□ 0.89
CDHR3-212ENST00000487084 ZNF639Q9UID6 485 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 NPFFR2Q9Y5X5 522 aa20.63■□□□□ 0.89
CDHR3-212ENST00000487084 CAPN14A8MX76 684 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 PIP5K1BO14986 540 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 PRPH2P23942 346 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 SERPINB5P36952 375 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 SERPINB4P48594 390 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 TMED10P49755 219 aaKnown RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 FBXW4P57775 412 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 KCNJ2P63252 427 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 NTRK2Q16620 822 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 BNC2Q6ZN30 1099 aaPredicted RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 Q6ZSR9 355 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 CROCCP2Q86T23 111 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 ZNF675Q8TD23 568 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 GFM2Q969S9 779 aaKnown RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 METTL2AQ96IZ6 378 aaKnown RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 NXF5Q9H1B4 397 aaKnown RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 ANKRA2Q9H9E1 313 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 SH2D2AQ9NP31 389 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 KCNK9Q9NPC2 374 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 TUBA8Q9NY65 449 aaPredicted RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 PRODH2Q9UF12 536 aa20.62■□□□□ 0.89
CDHR3-212ENST00000487084 CHCHD2Q9Y6H1 151 aaPredicted RBP20.62■□□□□ 0.89
CDHR3-212ENST00000487084 ICE1Q9Y2F5 2266 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 DIDO1Q9BTC0 2240 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 A0A1B0GTH9 108 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 TP53I11O14683 189 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 JUNP05412 331 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 FGF4P08620 206 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 TACR1P25103 407 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 NTSP30990 170 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 ARRB2P32121 409 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 MPIP34949 423 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 SOX18P35713 384 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 NCBP2P52298 156 aaKnown RBP eCLIP20.61■□□□□ 0.894e-15■■■■■ 27.4
CDHR3-212ENST00000487084 KIAA0040Q15053 153 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 RPS6KA2Q15349 733 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 PRSS53Q2L4Q9 553 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 LRIG3Q6UXM1 1119 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 RNF165Q6ZSG1 346 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 IKBIPQ70UQ0 350 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 HOMEZQ8IX15 550 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 FBXW8Q8N3Y1 598 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 C17orf47Q8NEP4 570 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 DIO2Q92813 273 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 EGLN2Q96KS0 407 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 JSRP1Q96MG2 331 aaPredicted RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 IL1RL2Q9HB29 575 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 SSU72Q9NP77 194 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 RYDENQ9NUL5 291 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 ZNF835Q9Y2P0 537 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 WBP11Q9Y2W2 641 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.61■□□□□ 0.89
CDHR3-212ENST00000487084 DOPEY1Q5JWR5 2465 aa20.61■□□□□ 0.89
CDHR3-212ENST00000487084 LSM1O15116 133 aaKnown RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 SKAP2O75563 359 aaPredicted RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 BCAS2O75934 225 aaPredicted RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 ESRRAP11474 423 aaPredicted RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 ABCD3P28288 659 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 HIST2H2BCQ6DN03 193 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 RGS9BPQ6ZS82 235 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 TMEM251Q8N6I4 163 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 CLHC1Q8NHS4 586 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 LCORQ96JN0 433 aaPredicted RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 TSSK3Q96PN8 268 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 CNIH4Q9P003 139 aa20.6■□□□□ 0.89
CDHR3-212ENST00000487084 CNOT11Q9UKZ1 510 aaKnown RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 BOKQ9UMX3 212 aaPredicted RBP20.6■□□□□ 0.89
CDHR3-212ENST00000487084 ATP6AP2A0A1C7CYW4 349 aa20.59■□□□□ 0.89
CDHR3-212ENST00000487084 NPIPB8E9PQR5 432 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms