RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NRF1Q16656 503 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OR2T5Q6IEZ7 315 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CDC73Q6P1J9 531 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 GUSBP11Q6P575 273 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZCCHC12Q6PEW1 402 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 GALNT10Q86SR1 603 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HIPK1Q86Z02 1210 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZDHHC13Q8IUH4 622 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SLC44A2Q8IWA5 706 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OR4N5Q8IXE1 308 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 LGI4Q8N135 537 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CBR4Q8N4T8 237 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OR4D9Q8NGE8 314 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OR2T29Q8NH02 315 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SPPL2AQ8TCT8 520 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF675Q8TD23 568 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ADAMTS15Q8TE58 950 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SLC38A5Q8WUX1 472 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 GEMIN6Q8WXD5 167 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PROX1Q92786 737 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 KAT2AQ92830 837 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 RAB8BQ92930 207 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 TMEM19Q96HH6 336 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF597Q96LX8 424 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 FRMD6Q96NE9 622 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF570Q96NI8 536 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF347Q96SE7 839 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PELOQ9BRX2 385 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 NDC1Q9BTX1 674 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 GTPBP2Q9BX10 602 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 BTBD2Q9BX70 525 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OSBPL10Q9BXB5 764 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 LRRN3Q9H3W5 708 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CACYBPQ9HB71 228 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SRA1Q9HD15 236 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PRTFDC1Q9NRG1 225 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HCN3Q9P1Z3 774 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 IFT80Q9P2H3 777 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF639Q9UID6 485 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OAZ3Q9UMX2 235 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 C19orf53Q9UNZ5 99 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PADI2Q9Y2J8 665 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PCDHGB3Q9Y5G1 929 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PCDHGA5Q9Y5G8 931 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 AP4B1Q9Y6B7 739 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 NUP210LQ5VU65 1888 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 KMT2EQ8IZD2 1858 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 UNC13CQ8NB66 2214 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CCDC88CQ9P219 2028 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 A0A1W2PS29 197 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 MAGEA13PA6NCF6 341 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 A6NJY4 79 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 FAM227AF5H4B4 570 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 hCG_2039718K7EN88 272 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 PDLIM1O00151 329 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 UPK1AO00322 258 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SOCS2O14508 198 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 EI24O14681 340 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 DSCR3O14972 297 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ADAMDEC1O15204 470 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 PLOD3O60568 738 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 COQ9O75208 318 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GCM2O75603 506 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 OPN1SWP03999 348 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 PDGFAP04085 211 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 RPLP0P05388 317 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 CTSBP07858 339 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 CKMT1AP12532 417 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ETS2P15036 469 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ALAS2P22557 587 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ALDH3A2P51648 485 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SNRPNP63162 240 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 KCNJ10P78508 379 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ID2Q02363 134 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 KCNC4Q03721 635 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 EPS8Q12929 822 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SLC13A2Q13183 592 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 DAG1Q14118 895 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SERTAD2Q14140 314 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GK3PQ14409 553 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 KCNAB1Q14722 419 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 LTB4RQ15722 352 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 SYPL1Q16563 259 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GPAT3Q53EU6 434 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF628Q5EBL2 1059 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 MFSD12Q6NUT3 480 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
SF3A3-206ENST00000487062 TTLL10Q6ZVT0 673 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 C16orf62Q7Z3J2 963 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 VTCN1Q7Z7D3 282 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 STK32CQ86UX6 486 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
SF3A3-206ENST00000487062 ST13P4Q8IZP2 240 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms