RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ADPRHP54922 357 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 LASP1Q14847 261 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TSTQ16762 297 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 ZNF750Q32MQ0 723 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 C18orf63Q68DL7 685 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 ZNF425Q6IV72 752 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC48A1Q6P1K1 146 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TUBA3EQ6PEY2 450 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CD300LDQ6UXZ3 194 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CCDC116Q8IYX3 515 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 LINC00471Q8N535 108 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 FGF14Q92915 247 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 YIPF4Q9BSR8 244 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CENPOQ9BU64 300 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TTYH1Q9H313 450 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 RNF167Q9H6Y7 350 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 A0A0G2JPF8 293 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 HNRNPCL2B2RXH8 293 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 HNRNPCL3B7ZW38 293 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TAF4O00268 1085 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CCRL2O00421 344 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CASC3O15234 703 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 FHP07954 510 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 HNRNPCL4P0DMR1 293 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 F3P13726 295 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CSNK2A2P19784 350 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TGM1P22735 817 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 RHAGQ02094 409 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 COX10Q12887 443 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 NDUFA9Q16795 377 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 TIMM50Q3ZCQ8 353 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SOWAHCQ53LP3 525 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 PRAMEF8Q5VWM4 474 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 PRAMEF7Q5VXH5 474 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 OR6T1Q8NGN1 323 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 OR8J1Q8NGP2 316 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 KLHL6Q8WZ60 621 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 PRRC1Q96M27 445 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CDADC1Q9BWV3 514 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC6A17Q9H1V8 727 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SYNPO2LQ9H987 977 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 FGF22Q9HCT0 170 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 MAN2C1Q9NTJ4 1040 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 DNAJC27Q9NZQ0 273 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 SNX7Q9UNH6 387 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 COLEC10Q9Y6Z7 277 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 NINQ8N4C6 2090 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 KRBA1A5PL33 1030 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 AGAP5A6NIR3 686 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 SCAMP1O15126 338 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 ALOX5P09917 674 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 CSTF2P33240 577 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 OCLNQ16625 522 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM107Q6UX40 140 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 ATCAYQ86WG3 371 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 OR4K5Q8NGD3 323 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 RPP25Q9BUL9 199 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 TRMT61BQ9BVS5 477 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 TAPBPLQ9BX59 468 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 PINK1Q9BXM7 581 aa16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 C6orf62Q9GZU0 229 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 RPL36Q9Y3U8 105 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM265A0A087WTH1 108 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3DA0A087WVF3 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3IA0A087WXS9 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3EA0A087X179 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3KA0A087X1G2 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 PRSS38A1L453 326 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3FA6NER0 549 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 ISM1B1AKI9 464 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3LB9A6J9 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 ARHGAP33O14559 1287 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 EMC8O43402 210 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3HP0C7X1 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 C8orf89P0DMQ9 161 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MMP11P24347 488 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 NTSR1P30989 418 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 BUD31P41223 144 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MAN2A2P49641 1150 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 RAB8AP61006 207 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 STXBP1P61764 594 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 PRR5P85299 388 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 NCF4Q15080 339 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 CEBPEQ15744 281 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 GPAT3Q53EU6 434 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM196Q5HYL7 178 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MFSD4BQ5TF39 518 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3GQ6DHY5 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3CQ6IPX1 549 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 PLEKHG7Q6ZR37 379 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 WDR53Q7Z5U6 358 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D3Q8IZP1 549 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 JPH3Q8WXH2 748 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 C16orf58Q96GQ5 468 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM80Q96HE8 168 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 OR2M4Q96R27 311 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms