RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 EGFP01133 1207 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 GKN3PP0CG01 181 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 GPR19Q15760 415 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 KIAA1211LQ6NV74 962 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF765Q7L2R6 523 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 MSRB3Q8IXL7 192 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 AREL1O15033 823 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 LCMT2O60294 686 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TFPIP10646 304 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CELP19835 753 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 KLHL22Q53GT1 634 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 RTL10Q7L3V2 364 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 DGLUCYQ7Z3D6 616 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 COMMD2Q86X83 199 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ZBTB8BQ8NAP8 495 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 BBS10Q8TAM1 723 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 WDR20Q8TBZ3 569 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TAS2R16Q9NYV7 291 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CD207Q9UJ71 328 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CACNA1IQ9P0X4 2223 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PIKFYVEQ9Y2I7 2098 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 BOLA2-SMG1P6H3BVE0 249 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 SGK494L7N484 410 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 FAAHO00519 579 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 RPS15AP62244 130 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CSNK1G2P78368 415 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 COX10Q12887 443 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ERV3-1Q14264 604 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ZSWIM7Q19AV6 140 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 EIPR1Q53HC9 387 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 METRNLQ641Q3 311 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 SLC27A4Q6P1M0 643 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 NRMQ8IXM6 262 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 SUN3Q8TAQ9 357 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 RLIMQ9NVW2 624 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 LYARQ9NX58 379 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ACTR10Q9NZ32 417 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 MRPS17Q9Y2R5 130 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TRBV4-1A0A0J9YWV2 114 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CLEC3AO75596 197 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 DHPSP49366 369 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 KIAA0040Q15053 153 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 BCL7AQ4VC05 210 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 GTF2IRD2BQ6EKJ0 949 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 GTF2IRD2Q86UP8 949 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 VRK2Q86Y07 508 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PHOSPHO1Q8TCT1 267 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TMEM80Q96HE8 168 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PTCHD1Q96NR3 888 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 CD180Q99467 661 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TNFRSF10DQ9UBN6 386 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 FAM186AA6NE01 2351 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 TMEM150CB9EJG8 249 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 RDH16O75452 317 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 AIFM1O95831 613 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 HTRA4P83105 476 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 EXOSC7Q15024 291 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 LRIF1Q5T3J3 769 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
HMGN1-216ENST00000486741 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 UFD1Q92890 307 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 MAN2B2Q9Y2E5 1009 aa12.51□□□□□ -0.41
HMGN1-216ENST00000486741 MIA3Q5JRA6 1907 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 A0A0A6YYC8 382 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PRR23D1E9PI22 279 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 BLOC1S5-TXNDC5H3BN57 136 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 I3L1I5 382 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PLOD3O60568 738 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 SOX30O94993 753 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PRR23D2P0DMB1 279 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GSTM3P21266 225 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 MYL9P24844 172 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 CTHP32929 405 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 DUSP6Q16828 381 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 RBM12BQ8IXT5 1001 aaKnown RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ZFYVE21Q9BQ24 234 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TUBA1CQ9BQE3 449 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms