RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 IGFBP1P08833 259 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 CD1EP15812 388 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 PRKACAP17612 351 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ITGAXP20702 1163 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 AGAP20933 346 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ARHGAP25P42331 645 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 CDKN1BP46527 198 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SERPINB8P50452 374 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ANXA11P50995 505 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ARSEP51690 589 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SMSP52788 366 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 KCNK10P57789 538 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ROR2Q01974 943 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TNFRSF17Q02223 184 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 GTF3C1Q12789 2109 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SCGB2A2Q13296 93 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 MFAP5Q13361 173 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TBCCQ15814 346 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 NTRK2Q16620 822 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 STX1AQ16623 288 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SLC5A12Q1EHB4 618 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SGO1Q5FBB7 561 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 FAM69AQ5T7M9 428 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF324BQ6AW86 544 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 FAM151BQ6UXP7 276 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF571Q7Z3V5 609 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SLC51BQ86UW2 128 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 AMIGO1Q86WK6 493 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 CFAP206Q8IYR0 622 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ELMOD2Q8IZ81 293 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 PLD5Q8N7P1 536 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 METTL6Q8TCB7 284 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF398Q8TD17 642 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 NR4A3Q92570 626 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 DLG3Q92796 817 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 GFM2Q969S9 779 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 FKBP10Q96AY3 582 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 MED30Q96HR3 178 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 APOPT1Q96IL0 206 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 THOC3Q96J01 351 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 LINC00615Q96LM1 132 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 OR1F2PQ96R84 312 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ABHD1Q96SE0 405 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 CIB1Q99828 191 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TRIM54Q9BYV2 358 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 CHRNA10Q9GZZ6 450 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SPRTNQ9H040 489 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 KLHL25Q9H0H3 589 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 HDHD2Q9H0R4 259 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 NGBQ9NPG2 151 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 GIMAP4Q9NUV9 329 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SMOXQ9NWM0 555 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 OXSMQ9NWU1 459 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ANAPC7Q9UJX3 599 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SLC9A8Q9Y2E8 581 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 PKP3Q9Y446 797 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TRAF6Q9Y4K3 522 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ANKHD1Q8IWZ3 2542 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 NF1P21359 2839 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 ABCA4P78363 2273 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TACC2O95359 2948 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 A0A0A6YYK5 440 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TRAV17A0A0B4J275 112 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 LRRC53A6NM62 1247 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF716A6NP11 495 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 IQCF5A8MTL0 148 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SOCS6O14544 535 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 BIRC5O15392 142 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PRICKLE3O43900 615 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PMPCBO75439 489 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 MFN2O95140 757 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 UNC5CO95185 931 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CHEK2O96017 543 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 AGTP01019 485 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 IFNA14P01570 189 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 EPOP01588 193 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CRYABP02511 175 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 APOA1P02647 267 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF735P0CB33 412 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 THRBP10828 461 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 UMPSP11172 480 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PKMP14618 531 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PVRP15151 417 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 GJC1P36383 396 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PBX1P40424 430 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PRKCIP41743 596 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CA7P43166 264 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CCT3P49368 545 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TDGF1P3P51864 188 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SLC16A1P53985 500 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PRKAA2P54646 552 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ARSFP54793 590 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 NAGLUP54802 743 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ARG2P78540 354 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SLC10A2Q12908 348 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 LCP2Q13094 533 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms