RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 LRRC25Q8N386 305 aaPredicted RBP11.96□□□□□ -0.49
SSR4-211ENST00000486204 LIX1Q8N485 282 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 ZNF615Q8N8J6 731 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 FNDC5Q8NAU1 212 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 SIMC1Q8NDZ2 872 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 CATSPER1Q8NEC5 780 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 ZNF675Q8TD23 568 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 ART5Q96L15 291 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 C7orf26Q96N11 449 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 CNPPD1Q9BV87 410 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 AKTIPQ9H8T0 292 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 SLCO1B3Q9NPD5 702 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 MIEF1Q9NQG6 463 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 PFDN4Q9NQP4 134 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 INTS9Q9NV88 658 aaKnown RBP11.96□□□□□ -0.49
SSR4-211ENST00000486204 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 COPS7AQ9UBW8 275 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 TEKT2Q9UIF3 430 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 NTNG1Q9Y2I2 539 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 ZNF780BQ9Y6R6 833 aa11.96□□□□□ -0.49
SSR4-211ENST00000486204 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 GABRR3A8MPY1 467 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 HDAC3O15379 428 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ZNF354AO60765 605 aaPredicted RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 ITGA10O75578 1167 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ZFAND5O76080 213 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 LRATO95237 230 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 PRPS2P11908 318 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 MAPK1P28482 360 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 TRHRP34981 398 aaPredicted RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 ASMTP46597 345 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 EMX2Q04743 252 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ART3Q13508 389 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 TUBA3CQ13748 450 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 EBPQ15125 230 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 IL23RQ5VWK5 629 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ANKRD26P1Q6NSI1 321 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 TUBA3EQ6PEY2 450 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 LARP4Q71RC2 724 aaKnown RBP eCLIP11.95□□□□□ -0.58e-13■■■■□ 22.2
SSR4-211ENST00000486204 FJX1Q86VR8 437 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ZNF227Q86WZ6 799 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 CCDC116Q8IYX3 515 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 ADCY4Q8NFM4 1077 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 PIWIL2Q8TC59 973 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 THAP3Q8WTV1 239 aaPredicted RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 CKAP2Q8WWK9 683 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 GFM2Q969S9 779 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 MAELQ96JY0 434 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 REEP4Q9H6H4 257 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 TRIM45Q9H8W5 580 aaPredicted RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 LIN28AQ9H9Z2 209 aaKnown RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 MYOTQ9UBF9 498 aa11.95□□□□□ -0.5
SSR4-211ENST00000486204 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
SSR4-211ENST00000486204 A0A1B0GUH1 482 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 DYTNA2CJ06 578 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 ATP8B1O43520 1251 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 AKAP10O43572 662 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 DYRK3O43781 588 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 NEURL1O76050 574 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 NADKO95544 446 aaPredicted RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 CBX7O95931 251 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 KITP10721 976 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 G6PDP11413 515 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 COX6B1P14854 86 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 CD96P40200 585 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 FRKP42685 505 aaPredicted RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 DIO3P55073 304 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 C21orf58P58505 322 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 ARG2P78540 354 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 TRMT12Q53H54 448 aaKnown RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 OGFOD2Q6N063 350 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 RNF111Q6ZNA4 994 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 RGS9BPQ6ZS82 235 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 RIMKLAQ8IXN7 391 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 SAMD14Q8IZD0 417 aaPredicted RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 OR9A2Q8NGT5 310 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 LRRC8CQ8TDW0 803 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 NUDT8Q8WV74 236 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 SIGLEC12Q96PQ1 595 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 RASL10BQ96S79 203 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 BRINP2Q9C0B6 783 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 OR10A5Q9H207 317 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 GLIPR2Q9H4G4 154 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 WDR55Q9H6Y2 383 aaPredicted RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 ANKRD10Q9NXR5 420 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 NOP53Q9NZM5 478 aaKnown RBP11.94□□□□□ -0.5
SSR4-211ENST00000486204 ATP6V1HQ9UI12 483 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 PCDHGA10Q9Y5H3 936 aa11.94□□□□□ -0.5
SSR4-211ENST00000486204 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
SSR4-211ENST00000486204 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
SSR4-211ENST00000486204 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
SSR4-211ENST00000486204 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms