RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FAM107AO95990 144 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CT62P0C5K7 136 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CPMP14384 443 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CD1EP15812 388 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 PCSK2P16519 638 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 DDX5P17844 614 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 PRPS1L1P21108 318 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 MMP11P24347 488 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ITGA3P26006 1051 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 GRNP28799 593 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 STT3AP46977 705 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CDK9P50750 372 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 CCL11P51671 97 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 POLR2JP52435 117 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 MRPS35P82673 323 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 CDC20Q12834 499 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 KLF10Q13118 480 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 RAPSNQ13702 412 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 EXOSC7Q15024 291 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 MPEG1Q2M385 716 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 BTBD16Q32M84 506 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 SPDYE7PQ495Y7 208 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 TIGD2Q4W5G0 525 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 C6orf10Q5SRN2 563 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 PCSK4Q6UW60 755 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 TMEM205Q6UW68 189 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 KIRREL2Q6UWL6 708 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 TMEM107Q6UX40 140 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 DNAJC14Q6Y2X3 702 aaPredicted RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 MRGPREQ86SM8 312 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 MTDHQ86UE4 582 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 CLECL1Q8IZS7 167 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 FAM9CQ8IZT9 166 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ZNF321PQ8N8H1 164 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CCDC197Q8NCU1 140 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 OR4A15Q8NGL6 344 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 OR9A2Q8NGT5 310 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ZFP28Q8NHY6 868 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.25□□□□□ -1.572e-9■■■□□ 17.2
COPS3-208ENST00000486032 THAP3Q8WTV1 239 aaPredicted RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 RIT1Q92963 219 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 VPS33AQ96AX1 596 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 VPS50Q96JG6 964 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 BBC3Q96PG8 261 aaPredicted RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 GLIPR2Q9H4G4 154 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 LIN28AQ9H9Z2 209 aaKnown RBP5.25□□□□□ -1.57
COPS3-208ENST00000486032 IL1RL2Q9HB29 575 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ADAP2Q9NPF8 381 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 EQTNQ9NQ60 294 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ATAD3AQ9NVI7 634 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ASIC5Q9NY37 505 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ZIM2Q9NZV7 527 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ATP6V1HQ9UI12 483 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 PCDHGB4Q9UN71 923 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 MAN2B2Q9Y2E5 1009 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ARL2BPQ9Y2Y0 163 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 PCDHGA6Q9Y5G7 932 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CLCA3PQ9Y6N3 262 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 CAPN7Q9Y6W3 813 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 NUP210LQ5VU65 1888 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 AHCTF1Q8WYP5 2266 aa5.25□□□□□ -1.57
COPS3-208ENST00000486032 ANKRD11Q6UB99 2663 aaPredicted RBP5.24□□□□□ -1.57
COPS3-208ENST00000486032 IGKV3D-11A0A0A0MRZ8 115 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 IGHV1-45A0A0A0MS14 117 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 TRBV11-1A0A0K0K1C0 115 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 FAM234BA2RU67 622 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 SAGE2PA6NJ88 616 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 A8MUI8 341 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 ANKRD28O15084 1053 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 PRKNO60260 465 aaPredicted RBP5.24□□□□□ -1.57
COPS3-208ENST00000486032 HPP00738 406 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 GSNP06396 782 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 PGRP06401 933 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 SLC35E2P0CK97 266 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 COX6A1P12074 109 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 FOSL1P15407 271 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 MPIP34949 423 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 MC3RP41968 323 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 CPA2P48052 419 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 ATP4BP51164 291 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 CASP9P55211 416 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 SLC26A5P58743 744 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 PHC1P78364 1004 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 TLE3Q04726 772 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 ZNF155Q12901 538 aaPredicted RBP5.24□□□□□ -1.57
COPS3-208ENST00000486032 PDE7AQ13946 482 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 PCOLCEQ15113 449 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 ELAVL1Q15717 326 aaKnown RBP5.24□□□□□ -1.57
COPS3-208ENST00000486032 NNATQ16517 81 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 MAPKAPK3Q16644 382 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 MMEL1Q495T6 779 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 VPS26BQ4G0F5 336 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 TRMT12Q53H54 448 aaKnown RBP5.24□□□□□ -1.57
COPS3-208ENST00000486032 METTL21CQ5VZV1 264 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 CPZQ66K79 652 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 FCRLBQ6BAA4 426 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 SLC2A7Q6PXP3 512 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 ANGPTL8Q6UXH0 198 aa5.24□□□□□ -1.57
COPS3-208ENST00000486032 RNF111Q6ZNA4 994 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms