RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 COCHO43405 550 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SPRY1O43609 319 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DFNA5O60443 496 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 HCN1O60741 890 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MITFO75030 526 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 NDUFS6O75380 124 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 STX11O75558 287 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CNMDO75829 334 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CELF2O95319 508 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 KRT6AP02538 564 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ALDOAP04075 364 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 FABP1P07148 127 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 APRTP07741 180 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SRPRAP08240 638 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 EBLN1P0CF75 366 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ITGA2P17301 1181 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 UGT1A1P22309 533 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MST1P26927 711 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CHI3L1P36222 383 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DLSTP36957 453 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 NAA10P41227 235 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 HCAR3P49019 387 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CDC34P49427 236 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 NDST1P52848 882 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 LIMK2P53671 638 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CACNA2D1P54289 1103 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 C21orf59P57076 290 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 RGS8P57771 180 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TIRAPP58753 221 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DAOAP59103 153 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 RPS15P62841 145 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CSNK1G2P78368 415 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 REEP5Q00765 189 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CSTF1Q05048 431 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF33AQ06730 810 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 BST2Q10589 180 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC10A2Q12908 348 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM132DQ14C87 1099 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PAFAH1B3Q15102 231 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SF3B4Q15427 424 aaKnown RBP eCLIP3.79□□□□□ -1.81e-8■■■■■ 33.2
PRPF38B-205ENST00000485810 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DCAF4L1Q3SXM0 396 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CCDC58Q4VC31 144 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 NCBP2-AS2Q69YL0 99 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PLAG1Q6DJT9 500 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 FAM171BQ6P995 826 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 FBXO46Q6PJ61 603 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 EPGNQ6UW88 154 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ALKAL1Q6UXT8 129 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DHDDSQ86SQ9 333 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SETD3Q86TU7 594 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM135Q86UB9 458 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 WDR5BQ86VZ2 330 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PDSS2Q86YH6 399 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SIAH3Q8IW03 269 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CTAGE3PQ8IX95 158 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MICU2Q8IYU8 434 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DNAJC5GQ8N7S2 189 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CADM4Q8NFZ8 388 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 OR10Z1Q8NGY1 313 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 C9orf43Q8TAL5 461 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 RDH11Q8TC12 318 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 GPX8Q8TED1 209 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC25A43Q8WUT9 341 aaPredicted RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 HTR3CQ8WXA8 447 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PYDC1Q8WXC3 89 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ROBO4Q8WZ75 1007 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 LPGAT1Q92604 370 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 NTAN1Q96AB6 310 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CMTM5Q96DZ9 223 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 LINGO1Q96FE5 620 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 REXO5Q96IC2 774 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MRGPRX4Q96LA9 322 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF778Q96MU6 729 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 OPALINQ96PE5 141 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CSPG4P5Q96PW8 444 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 HAPLN3Q96S86 360 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SORT1Q99523 831 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TSC22D3Q99576 134 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CPNE1Q99829 537 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ECSITQ9BQ95 431 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PELOQ9BRX2 385 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 WACQ9BTA9 647 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ALG12Q9BV10 488 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 SPATA5L1Q9BVQ7 753 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TRIM15Q9C019 465 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ROGDIQ9GZN7 287 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 C20orf27Q9GZN8 174 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 GAL3ST2Q9H3Q3 398 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ASB8Q9H765 288 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 C10orf88Q9H8K7 445 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MINDY3Q9H8M7 445 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 C19orf12Q9NSK7 152 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ZCCHC3Q9NUD5 404 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 EXD2Q9NVH0 621 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ELOVL2Q9NXB9 296 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms