RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 SIRT3Q9NTG7 399 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-213ENST00000485530 ERVK-19Q9WJR5 959 aa11.36□□□□□ -0.59
TRA2B-213ENST00000485530 A8MUI8 341 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 PLOD2O00469 737 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 PDPK1O15530 556 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 SNX3O60493 162 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 HPCAL1P37235 193 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 EMDP50402 254 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 RPS6KA2Q15349 733 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 FAM174BQ3ZCQ3 159 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ATCAYQ86WG3 371 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 GALNT12Q8IXK2 581 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 MIER2Q8N344 545 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 CPSF7Q8N684 471 aaKnown RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 SIRT6Q8N6T7 355 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ZNF675Q8TD23 568 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 THAP3Q8WTV1 239 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ELP4Q96EB1 424 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 PELOQ9BRX2 385 aaKnown RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 CNPPD1Q9BV87 410 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 BHLHE41Q9C0J9 482 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 LHPPQ9H008 270 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 SAR1AQ9NR31 198 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ACSS1Q9NUB1 689 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-213ENST00000485530 ZIM2Q9NZV7 527 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
TRA2B-213ENST00000485530 TRBV11-1A0A0K0K1C0 115 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 A0A1W2PRB8 838 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ASPDHA6ND91 283 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 UPK1AO00322 258 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 PLOD3O60568 738 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 C6orf47O95873 294 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ITGA3P26006 1051 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SOX11P35716 441 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 MC3RP41968 323 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 UQCRFS1P47985 274 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ATP4BP51164 291 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
TRA2B-213ENST00000485530 MANFP55145 182 aaKnown RBP11.34□□□□□ -0.59
TRA2B-213ENST00000485530 HBA1P69905 142 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 RNF4P78317 190 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SRSF11Q05519 484 aaKnown RBP11.34□□□□□ -0.59
TRA2B-213ENST00000485530 HSPB3Q12988 150 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 MLC1Q15049 377 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 TLR1Q15399 786 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 TCTN3Q6NUS6 607 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 TMEM107Q6UX40 140 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SPATA21Q7Z572 469 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CPLX4Q7Z7G2 160 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SAMD14Q8IZD0 417 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CLEC4FQ8N1N0 589 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 VWA5B2Q8N398 1253 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 C7orf57Q8NEG2 295 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 VMP1Q96GC9 406 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 VPS50Q96JG6 964 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CCT8L2Q96SF2 557 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 PRPF18Q99633 342 aaKnown RBP11.34□□□□□ -0.59
TRA2B-213ENST00000485530 INPP5KQ9BT40 448 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 OR10A5Q9H207 317 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CDCP1Q9H5V8 836 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CXorf36Q9H7Y0 433 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SERHLQ9NQF3 203 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 SLC6A13Q9NSD5 602 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 GPR83Q9NYM4 423 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 NTMQ9P121 344 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 PTGFRNQ9P2B2 879 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 ENTPD4Q9Y227 616 aa11.34□□□□□ -0.59
TRA2B-213ENST00000485530 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 PRSS51A0A1B0GVH4 220 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 FAM234BA2RU67 622 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 SYNDIG1LA6NDD5 238 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 ZFAND5O76080 213 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 PSMG1O95456 288 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 PGRP06401 933 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 S100A3P33764 101 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 RPL3P39023 403 aaKnown RBP11.33□□□□□ -0.6
TRA2B-213ENST00000485530 CDKN2CP42773 168 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 KIR3DL1P43629 444 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 CLCN2P51788 898 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 CLNS1AP54105 237 aaKnown RBP11.33□□□□□ -0.6
TRA2B-213ENST00000485530 AGKQ53H12 422 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-213ENST00000485530 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-213ENST00000485530 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-213ENST00000485530 HSDL2Q6YN16 418 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 FAM9CQ8IZT9 166 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 OR2L13Q8N349 312 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 ZNF441Q8N8Z8 693 aa11.33□□□□□ -0.6
TRA2B-213ENST00000485530 OR7G1Q8NGA0 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms