RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MFAP5Q13361 173 aa11□□□□□ -0.65
APTX-227ENST00000485479 PRR30Q53SZ7 412 aaPredicted RBP11□□□□□ -0.65
APTX-227ENST00000485479 H3F3CQ6NXT2 135 aa11□□□□□ -0.65
APTX-227ENST00000485479 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
APTX-227ENST00000485479 SPATA19Q7Z5L4 167 aa11□□□□□ -0.65
APTX-227ENST00000485479 GALNT10Q86SR1 603 aa11□□□□□ -0.65
APTX-227ENST00000485479 VPS33AQ96AX1 596 aa11□□□□□ -0.65
APTX-227ENST00000485479 RASL10BQ96S79 203 aa11□□□□□ -0.65
APTX-227ENST00000485479 YIPF4Q9BSR8 244 aa11□□□□□ -0.65
APTX-227ENST00000485479 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11□□□□□ -0.65
APTX-227ENST00000485479 ADNPQ9H2P0 1102 aa11□□□□□ -0.65
APTX-227ENST00000485479 CLMPQ9H6B4 373 aa11□□□□□ -0.65
APTX-227ENST00000485479 EPS8L2Q9H6S3 715 aa11□□□□□ -0.65
APTX-227ENST00000485479 KLHL1Q9NR64 748 aa11□□□□□ -0.65
APTX-227ENST00000485479 SIRT3Q9NTG7 399 aaPredicted RBP11□□□□□ -0.65
APTX-227ENST00000485479 DDX18Q9NVP1 670 aaKnown RBP11□□□□□ -0.65
APTX-227ENST00000485479 C2orf92A0A1B0GVN3 265 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 G3V3Y1 287 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 OR6B1O95007 311 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 TGDSO95455 350 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 IDO1P14902 403 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 GPX3P22352 226 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 LSP1P33241 339 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 SOAT1P35610 550 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 CD96P40200 585 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZFP36L2P47974 494 aaKnown RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 EMDP50402 254 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 MAP4K2Q12851 820 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 TUBA3CQ13748 450 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 MEP1AQ16819 746 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 SMU1Q2TAY7 513 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 TIGD2Q4W5G0 525 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 FHL5Q5TD97 284 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 JMJD6Q6NYC1 403 aaPredicted RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 TUBA3EQ6PEY2 450 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 IL20RBQ6UXL0 311 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 SLC29A4Q7RTT9 530 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 MDGA2Q7Z553 956 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 OR4N2Q8NGD1 307 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF675Q8TD23 568 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ELP4Q96EB1 424 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZBED6CLQ96FA7 236 aaPredicted RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 NXF5Q9H1B4 397 aaKnown RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 CXorf36Q9H7Y0 433 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF639Q9UID6 485 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 WBP11Q9Y2W2 641 aaKnown RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF451Q9Y4E5 1061 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 CFAP46Q8IYW2 2715 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 DYTNA2CJ06 578 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 PYCARD-AS1I3L0S3 204 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 CPSF4O95639 269 aaKnown RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 FRKP42685 505 aaPredicted RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 CDKN2CP42773 168 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 GPR85P60893 370 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 RPS26P62854 115 aaKnown RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF155Q12901 538 aaPredicted RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 SLC6A19Q695T7 634 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF227Q86WZ6 799 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 HOMEZQ8IX15 550 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 TMEM156Q8N614 296 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 COQ8BQ96D53 544 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 CHMP6Q96FZ7 201 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ART5Q96L15 291 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 ZNF354BQ96LW1 612 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 INPP5KQ9BT40 448 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 SDR39U1Q9NRG7 319 aaPredicted RBP10.99□□□□□ -0.65
APTX-227ENST00000485479 TEKT2Q9UIF3 430 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 TUBD1Q9UJT1 453 aa10.99□□□□□ -0.65
APTX-227ENST00000485479 SCN2BO60939 215 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 SLC22A3O75751 556 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 GSNP06396 782 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
APTX-227ENST00000485479 GALNSP34059 522 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 RFX3P48380 749 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 MLLT10P55197 1068 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 PMP22Q01453 160 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 BIKQ13323 160 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 UBAP2LQ14157 1087 aaKnown RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 OR1C1Q15619 314 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 NPSR1Q6W5P4 371 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 SAMD14Q8IZD0 417 aaPredicted RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 MIER2Q8N344 545 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 TEX19Q8NA77 164 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 OR4A15Q8NGL6 344 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 ADIPOR1Q96A54 375 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 MTERF3Q96E29 417 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 FAM120BQ96EK7 910 aaKnown RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 C16orf58Q96GQ5 468 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 PRPF18Q99633 342 aaKnown RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 TRIM4Q9C037 500 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 FOLH1BQ9HBA9 442 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 SLC6A13Q9NSD5 602 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 ZCCHC3Q9NUD5 404 aaKnown RBP10.98□□□□□ -0.65
APTX-227ENST00000485479 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 LRFN1Q9P244 771 aa10.98□□□□□ -0.65
APTX-227ENST00000485479 HEMK1Q9Y5R4 338 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms