RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 SPRR3Q9UBC9 169 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 CNOT11Q9UKZ1 510 aaKnown RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 L3MBTL1Q9Y468 752 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PCDHGB3Q9Y5G1 929 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 A0A087WUV0 522 aaPredicted RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 ANKRD33BA6NCL7 494 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 AHRRA9YTQ3 701 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 DVL2O14641 736 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 IL2RAP01589 272 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 CPMP14384 443 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 TAC1P20366 129 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 ENDOUP21128 410 aaKnown RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 UQCRC1P31930 480 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 ADH7P40394 386 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 IST1P53990 364 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 DLX5P56178 289 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 DUSP8Q13202 625 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 GGTA1PQ4G0N0 100 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 TMEM64Q6YI46 380 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 RELL1Q8IUW5 271 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 ULK2Q8IYT8 1036 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 VWA5B2Q8N398 1253 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 MNS1Q8NEH6 495 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 UHMK1Q8TAS1 419 aaKnown RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 UCN3Q969E3 161 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 HSPBAP1Q96EW2 488 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 RILPQ96NA2 401 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 NSUN5Q96P11 429 aaKnown RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 SECISBP2Q96T21 854 aaKnown RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 MRPL57Q9BQC6 102 aaKnown RBP12.15□□□□□ -0.46
UBA3-210ENST00000485424 TMUB1Q9BVT8 246 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 CAMK2AQ9UQM7 478 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.46
UBA3-210ENST00000485424 ARID1AO14497 2285 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 LRRC3CA6NJW4 275 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 TRIM49D1C9J1S8 452 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 PDYNP01213 254 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 CT62P0C5K7 136 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
UBA3-210ENST00000485424 FUT7Q11130 342 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 TRAF3Q13114 568 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 NNATQ16517 81 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 FBXW10Q5XX13 1052 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 COMMD6Q7Z4G1 85 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 LIX1LQ8IVB5 337 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 METTL4Q8N3J2 472 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 TRPC4APQ8TEL6 797 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 KLHL29Q96CT2 875 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 DTNBP1Q96EV8 351 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 BRF2Q9HAW0 419 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 PROK2Q9HC23 129 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 DNAJB12Q9NXW2 375 aaKnown RBP12.14□□□□□ -0.47
UBA3-210ENST00000485424 ZNF180Q9UJW8 692 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 EDARQ9UNE0 448 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
UBA3-210ENST00000485424 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 A0A1W2PS29 197 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 GNB5O14775 395 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 TRIM3O75382 744 aaPredicted RBP12.13□□□□□ -0.47
UBA3-210ENST00000485424 CTAG2O75638 210 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 SUPT7LO94864 414 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 KRT6AP02538 564 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 CLPSP04118 112 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 KRT6BP04259 564 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
UBA3-210ENST00000485424 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 BMP5P22003 454 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ABCD3P28288 659 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 HMOX2P30519 316 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
UBA3-210ENST00000485424 MAGEA12P43365 314 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 KIR2DL3P43628 341 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 KRT6CP48668 564 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 CDH13P55290 713 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 PLCXD2Q0VAA5 305 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 RCAN2Q14206 197 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 BICRALQ6AI39 1079 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 SLC48A1Q6P1K1 146 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 LACC1Q8IV20 430 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 MMGT1Q8N4V1 131 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ZNF615Q8N8J6 731 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 C17orf47Q8NEP4 570 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ADCY4Q8NFM4 1077 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 NINJ1Q92982 152 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ISL2Q96A47 359 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 TMEM41AQ96HV5 264 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 FOXC2Q99958 501 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms