RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RNASE6Q93091 150 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 HGDQ93099 445 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TM4SF18Q96CE8 201 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 PAFAH2Q99487 392 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 SH3GL2Q99962 352 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 MRPL1Q9BYD6 325 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CXXC4Q9H2H0 198 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 MRPL46Q9H2W6 279 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ELOVL6Q9H5J4 265 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NMRK1Q9NWW6 199 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TRPS1Q9UHF7 1281 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 SNX6Q9UNH7 406 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NINQ8N4C6 2090 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 C15orf38-AP3S2A0A0A6YYH1 394 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 DVL2O14641 736 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 ACOX3O15254 700 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 ACSL3O95573 720 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 PTPN6P29350 595 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 ARL1P40616 181 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-206ENST00000484733 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 DCAF7P61962 342 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 SNTA1Q13424 505 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 TIGD3Q6B0B8 471 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 COMMD6Q7Z4G1 85 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 WDR53Q7Z5U6 358 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-206ENST00000484733 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 RELL2Q8NC24 303 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-206ENST00000484733 TNIP2Q8NFZ5 429 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 FAM222BQ8WU58 562 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 DCAKDQ8WVC6 231 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 CTHRC1Q96CG8 243 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 CALHM2Q9HA72 323 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 DNAJB12Q9NXW2 375 aaKnown RBP10.48□□□□□ -0.73
SCFD1-206ENST00000484733 MAT2BQ9NZL9 334 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 PSME2Q9UL46 239 aa10.48□□□□□ -0.73
SCFD1-206ENST00000484733 TO15178 435 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 PDYNP01213 254 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 SBK3P0C264 359 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 HSD3B1P14060 373 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 KRT15P19012 456 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 HSD3B2P26439 372 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 SOX18P35713 384 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 BICRALQ6AI39 1079 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 WDYHV1Q96HA8 205 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 LCORQ96JN0 433 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 GNRHR2Q96P88 292 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 FOXC2Q99958 501 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 NXF5Q9H1B4 397 aaKnown RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 SLC12A4Q9UP95 1085 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 CSMD2Q7Z408 3487 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 F8P00451 2351 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 MBD3L4A6NDZ8 208 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 MBD3L3A6NE82 208 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 MBD3L5A6NJ08 208 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 TRAPPC6AO75865 159 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 IL18BPO95998 194 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ACTL6AO96019 429 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 BMP7P18075 431 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 DRD5P21918 477 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 DEKP35659 375 aaKnown RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 PTGDSP41222 190 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 MASP1P48740 699 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ART1P52961 327 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 DAZAP2Q15038 168 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 LETMD1Q6P1Q0 360 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 FAM111BQ6SJ93 734 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 TIFABQ6ZNK6 161 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 NAXEQ8NCW5 288 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 MBD3L2Q8NHZ7 208 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ZPLD1Q8TCW7 415 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 SELENOMQ8WWX9 145 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ERP27Q96DN0 273 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF681Q96N22 645 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 FAIM2Q9BWQ8 316 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 UGT2B28Q9BY64 529 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 RASSF1Q9NS23 344 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 FARSBQ9NSD9 589 aaKnown RBP10.47□□□□□ -0.73
SCFD1-206ENST00000484733 PRODH2Q9UF12 536 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 DTX4Q9Y2E6 619 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 ADGRG4Q8IZF6 3080 aa10.47□□□□□ -0.73
SCFD1-206ENST00000484733 A8MT66 165 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 TRIM49D1C9J1S8 452 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 SNPHO15079 494 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 BCAS2O75934 225 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-206ENST00000484733 GOSR1O95249 250 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 CBX7O95931 251 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 IL2RAP01589 272 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 PPICP45877 212 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 PSPHP78330 225 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 FLYWCH1Q4VC44 716 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 GLE1Q53GS7 698 aaKnown RBP10.46□□□□□ -0.73
SCFD1-206ENST00000484733 LCA5Q86VQ0 697 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 ZZZ3Q8IYH5 903 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 OR1J4Q8NGS1 313 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF675Q8TD23 568 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 ABTB1Q969K4 478 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-206ENST00000484733 BRINP2Q9C0B6 783 aa10.46□□□□□ -0.73
SCFD1-206ENST00000484733 DMGDHQ9UI17 866 aaKnown RBP10.46□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF225Q9UK10 706 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms