RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CAMKMTQ7Z624 323 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 LIX1Q8N485 282 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 BCORP1Q8N888 145 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 DNAJB8Q8NHS0 232 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 GRHL3Q8TE85 626 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 DOK4Q8TEW6 326 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 FAR1Q8WVX9 515 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF75CPQ92670 426 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 TMEM125Q96AQ2 219 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 PPCDCQ96CD2 204 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 C7orf26Q96N11 449 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 TAAR6Q96RI8 345 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 BBS4Q96RK4 519 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 TRIM4Q9C037 500 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 AKTIPQ9H8T0 292 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 LIN28AQ9H9Z2 209 aaKnown RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 SH2D2AQ9NP31 389 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 ACSS1Q9NUB1 689 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 ASF1BQ9NVP2 202 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 HPF1Q9NWY4 346 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 MAPRE3Q9UPY8 281 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 EIF3LQ9Y262 564 aaKnown RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 C2orf92A0A1B0GVN3 265 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 CYSRT1A8MQ03 144 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 SDHDO14521 159 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 PDPK1O15530 556 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 PRPS1L1P21108 318 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 EMDP50402 254 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 NCBP2P52298 156 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■■■■□ 22.1
UPF3A-208ENST00000484246 DCAF7P61962 342 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 MRPS35P82673 323 aaKnown RBP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 PTGR1Q14914 329 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 MLC1Q15049 377 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 TRMT12Q53H54 448 aaKnown RBP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF385BQ569K4 471 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 LARP4Q71RC2 724 aaKnown RBP eCLIP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 ATCAYQ86WG3 371 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 RIMKLAQ8IXN7 391 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 TAGAPQ8N103 731 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 OR2L13Q8N349 312 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 NATD1Q8N6N6 113 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 POGLUT1Q8NBL1 392 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 ADCY4Q8NFM4 1077 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 OR52R1Q8NGF1 315 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 NR4A3Q92570 626 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 SPACA9Q96E40 222 aaPredicted RBP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 ZBED6CLQ96FA7 236 aaPredicted RBP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 MAELQ96JY0 434 aaKnown RBP14.68□□□□□ -0.06
UPF3A-208ENST00000484246 FRMD6Q96NE9 622 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 BTBD9Q96Q07 612 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 GAL3ST4Q96RP7 486 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 C1orf50Q9BV19 199 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 HES7Q9BYE0 225 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 GLIPR2Q9H4G4 154 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 TIMMDC1Q9NPL8 285 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
UPF3A-208ENST00000484246 UQCRHLA0A096LP55 91 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 TRPC5OSA6NMA1 111 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 TO15178 435 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 ACOX3O15254 700 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 COQ9O75208 318 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 WISP1O95388 367 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 CRYABP02511 175 aaKnown RBP14.67□□□□□ -0.06
UPF3A-208ENST00000484246 LBPP18428 481 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 PTGER1P34995 402 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 CLDN8P56748 225 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 EXOSC7Q15024 291 aaKnown RBP14.67□□□□□ -0.06
UPF3A-208ENST00000484246 NTRK2Q16620 822 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 HLA-DQA1Q5Y7H0 255 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 RGS9BPQ6ZS82 235 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 GALNTL5Q7Z4T8 443 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 FAM98AQ8NCA5 519 aaKnown RBP14.67□□□□□ -0.06
UPF3A-208ENST00000484246 PSD4Q8NDX1 1056 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 OR7G2Q8NG99 324 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 CLHC1Q8NHS4 586 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 ZFP28Q8NHY6 868 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 PIWIL2Q8TC59 973 aaKnown RBP14.67□□□□□ -0.06
UPF3A-208ENST00000484246 VSTM2LQ96N03 204 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 NTMQ9P121 344 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 MAP10Q9P2G4 905 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 C19orf53Q9UNZ5 99 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-208ENST00000484246 ERVK-11Q9UQG0 969 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 DTX4Q9Y2E6 619 aa14.67□□□□□ -0.06
UPF3A-208ENST00000484246 FRG2CA6NGY1 282 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 CAPN14A8MX76 684 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 AKAP10O43572 662 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 LRATO95237 230 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 G6PDP11413 515 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 EDN3P14138 238 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 NAGAP17050 411 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 DRD5P21918 477 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 PPICP45877 212 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 TMED10P49755 219 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 TDGF1P3P51864 188 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 IGFBP7Q16270 282 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 MDGA2Q7Z553 956 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 WDR75Q8IWA0 830 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ZFP62Q8NB50 900 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ST6GALNAC3Q8NDV1 305 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms