RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 DERL2Q9GZP9 239 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 NXF5Q9H1B4 397 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 OPN3Q9H1Y3 402 aaPredicted RBP7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 CAB39LQ9H9S4 337 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 LZTFL1Q9NQ48 299 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 SERHLQ9NQF3 203 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 NDRG3Q9UGV2 375 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 FBXL2Q9UKC9 423 aa7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 EXO1Q9UQ84 846 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-208ENST00000484084 PABPN1LA6NDY0 278 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 FRG2CA6NGY1 282 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 H0Y3Z8 333 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 H0YC42 278 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 OVOL3O00110 214 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 DNALI1O14645 258 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 TP53I11O14683 189 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CASKO14936 926 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CLGNO14967 610 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 UGT2B11O75310 529 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CTAGE8P0CG41 777 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 HPDP32754 393 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CD79BP40259 229 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SSR2P43308 183 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CPA2P48052 419 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 GAS1P54826 345 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 TPD52P55327 224 aaPredicted RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 DUSP2Q05923 314 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 TGM3Q08188 693 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 DLG1Q12959 904 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 GAB1Q13480 694 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 LAPTM5Q13571 262 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 RCAN2Q14206 197 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 FASTKD3Q14CZ7 662 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SULT1C3Q6IMI6 304 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SH2D5Q6ZV89 423 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 GAS2L3Q86XJ1 694 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 HIPK1Q86Z02 1210 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CTAGE4Q8IX94 777 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 TAGAPQ8N103 731 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 MEIOBQ8N635 442 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SRFBP1Q8NEF9 429 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 C7orf57Q8NEG2 295 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 OR1J4Q8NGS1 313 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CMTM7Q96FZ5 175 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 NAT9Q9BTE0 207 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CD244Q9BZW8 370 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 OR10A5Q9H207 317 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 DDX31Q9H8H2 851 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 POPDC3Q9HBV1 291 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 PPANQ9NQ55 473 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SNX15Q9NRS6 342 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 MS4A12Q9NXJ0 267 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 ZNF639Q9UID6 485 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 RNF112Q9ULX5 631 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 CHMP2BQ9UQN3 213 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 MTO1Q9Y2Z2 717 aaKnown RBP7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 TSC22D4Q9Y3Q8 395 aa7.79□□□□□ -1.16
RTFDC1-208ENST00000484084 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 A0A096LNT2 108 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 CXorf49A8MYA2 514 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 CES2O00748 559 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 PPM1BO75688 479 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 CBR3O75828 277 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 C8BP07358 591 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 RHOXF2BP0C7M4 288 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 MTHFD2P13995 350 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 NAGAP17050 411 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 MASP1P48740 699 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 SUCLG1P53597 346 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 HMGCS1Q01581 520 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 IRF8Q02556 426 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 SETDB1Q15047 1291 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 TOMM20Q15388 145 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 ZKSCAN8Q15776 578 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 NNATQ16517 81 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 SLC30A6Q6NXT4 461 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 MED27Q6P2C8 311 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 FRA10AC1Q70Z53 315 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 ISCA2Q86U28 154 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 TCAIMQ8N3R3 496 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 SNX31Q8N9S9 440 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 ZNF610Q8N9Z0 462 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 FIG4Q92562 907 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 RGMAQ96B86 450 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 PGM2Q96G03 612 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 CFAP36Q96G28 342 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 KRT12Q99456 494 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 MTERF1Q99551 399 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 ZNF226Q9NYT6 803 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 CES1P1Q9UKY3 287 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 DLGAP4Q9Y2H0 992 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 SPACA6W5XKT8 324 aa7.78□□□□□ -1.16
RTFDC1-208ENST00000484084 ROS1P08922 2347 aa7.77□□□□□ -1.17
RTFDC1-208ENST00000484084 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-208ENST00000484084 CAPN14A8MX76 684 aa7.77□□□□□ -1.17
RTFDC1-208ENST00000484084 C16orf97H3BN30 126 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms