RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ANKRD33BA6NCL7 494 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 H0YIV9 168 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 OR7A17O14581 309 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 EIF3HO15372 352 aaKnown RBP eCLIP12.68□□□□□ -0.38
VARS-226ENST00000483275 NME6O75414 186 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 KLK1P06870 262 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 TMIGD3P0DMS9 266 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 EPXP11678 715 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 GPX3P22352 226 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 CTSSP25774 331 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 ABCD3P28288 659 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 PLTPP55058 493 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 ETF1P62495 437 aaKnown RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 PHEXP78562 749 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 DUSP2Q05923 314 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 FUT7Q11130 342 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 CBLBQ13191 982 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 DAZAP2Q15038 168 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 LTB4RQ15722 352 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 SGO1Q5FBB7 561 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 TBCELQ5QJ74 424 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 LIPJQ5W064 366 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 SYT10Q6XYQ8 523 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 PM20D2Q8IYS1 436 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 ADCY4Q8NFM4 1077 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 FBXO25Q8TCJ0 367 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 ABTB1Q969K4 478 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 MBD6Q96DN6 1003 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 NODALQ96S42 347 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 YIPF4Q9BSR8 244 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 GALNT8Q9NY28 637 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
VARS-226ENST00000483275 ACOT9Q9Y305 439 aa12.68□□□□□ -0.38
VARS-226ENST00000483275 A0A1B0GTL3 188 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 C17orf51A8MQB3 221 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 SYCE1LA8MT33 242 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 H0Y3Z8 333 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 SNX4O95219 450 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 C2P06681 752 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 ABCB1P08183 1280 aaPredicted RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 CPMP14384 443 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 KRT15P19012 456 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 S1PR1P21453 382 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 STX2P32856 288 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 PTGDSP41222 190 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 MAGEA4P43358 317 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 TMED10P49755 219 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 XKP51811 444 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 ALDH18A1P54886 795 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 NRG3P56975 720 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 DCAF7P61962 342 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 LTBQ06643 244 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 ILF2Q12905 390 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 BIKQ13323 160 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 CUL3Q13618 768 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
VARS-226ENST00000483275 TIGD3Q6B0B8 471 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 OR4K14Q8NGD5 310 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 HGDQ93099 445 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 TP53INP1Q96A56 240 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 INTS12Q96CB8 462 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 REPS1Q96D71 796 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 TMEM41AQ96HV5 264 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 RBM24Q9BX46 236 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 NOL11Q9H8H0 719 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 FARSBQ9NSD9 589 aaKnown RBP12.67□□□□□ -0.38
VARS-226ENST00000483275 BCAP29Q9UHQ4 241 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 TSC22D4Q9Y3Q8 395 aa12.67□□□□□ -0.38
VARS-226ENST00000483275 A0A087X1B8 175 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 A0A096LPK6 155 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 CAPN14A8MX76 684 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 PPM1BO75688 479 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 HRGP04196 525 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 CYP4B1P13584 511 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 CPOXP36551 454 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 PEX19P40855 299 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 CPA2P48052 419 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 STARP49675 285 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 PLCXD2Q0VAA5 305 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 C6orf163Q5TEZ5 329 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 CAMKMTQ7Z624 323 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 KIF18BQ86Y91 864 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
VARS-226ENST00000483275 L3MBTL4Q8NA19 623 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms