RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF596Q8TC21 504 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ASB10Q8WXI3 467 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SMPDL3BQ92485 455 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 RBM41Q96IZ5 413 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 SLC38A3Q99624 504 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ARRDC1-AS1Q9H2J1 176 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 UBE2ZQ9H832 354 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 IL1RL2Q9HB29 575 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 MTCH1Q9NZJ7 389 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 EHD3Q9NZN3 535 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 MEMO1Q9Y316 297 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PPIL1Q9Y3C6 166 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 OR6C75A6NL08 312 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 HSBP1L1C9JCN9 74 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ATP6V1G1O75348 118 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 OR6A2O95222 327 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SSTR1P30872 391 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CD81P60033 236 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PJVKQ0ZLH3 352 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 UGT3A2Q3SY77 523 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PRAMEF5Q5TYX0 476 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PRAMEF6Q5VXH4 476 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ASCL4Q6XD76 172 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 DCDC5Q6ZRR9 648 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 Q6ZSN1 163 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CPEB2Q7Z5Q1 589 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 PIP4P1Q86T03 277 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CROCCP3Q8IVE0 287 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 TMEM199Q8N511 208 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ASCC1Q8N9N2 400 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 ACBD4Q8NC06 268 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PNPT1Q8TCS8 783 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 LKAAEAR1Q8TD35 194 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SLC2A14Q8TDB8 520 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 DAZLQ92904 295 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 FAM71F1Q96KD3 344 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 NUSAP1Q9BXS6 441 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 MSL2Q9HCI7 577 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 B3GAT1Q9P2W7 334 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 IGSF9BQ9UPX0 1349 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 RAI2Q9Y5P3 530 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 WNT6Q9Y6F9 365 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ZNF292O60281 2723 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 UMODL1Q5DID0 1318 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 LOC100653049A0A140TA62 436 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 FAM149AA5PLN7 773 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 HHLA1C9JL84 531 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SPECC1L-ADORA2AF8WAN1 911 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SCAMP2O15127 329 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 KRT34O76011 436 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PIGNO95427 931 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CPNE6O95741 557 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ITGB3P05106 788 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 MMP3P08254 477 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 NAGAP17050 411 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CFPP27918 469 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CETN2P41208 172 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 NSFP46459 744 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 ARHGDIBP52566 201 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SLC34A1Q06495 639 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 BTG3Q14201 252 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 ITIH4Q14624 930 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CHRNA6Q15825 494 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PDZK1Q5T2W1 519 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 LYSMD4Q5XG99 296 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SDR9C7Q8NEX9 313 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 OR10Q1Q8NGQ4 319 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 DDI1Q8WTU0 396 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 FAM3CQ92520 227 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ANKRD7Q92527 254 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ZNF419Q96HQ0 510 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 PRRG3Q9BZD7 231 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 CIPCQ9C0C6 399 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 RGS18Q9NS28 235 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SERTAD4Q9NUC0 356 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 QPCTLQ9NXS2 382 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SPATA7Q9P0W8 599 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 KLHL8Q9P2G9 620 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 ERRFI1Q9UJM3 462 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 ZFR2Q9UPR6 939 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 GMEB1Q9Y692 573 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 THADAQ6YHU6 1953 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 A0A1B0GUS0 222 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 A0A1W2PPE3 182 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 PRSS37A4D1T9 235 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 LINC00473A8K010 186 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 C17orf105B2RV13 164 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 TCP11X1B4DZS4 312 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 CHUKO15111 745 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 NME2P1O60361 137 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 SRPX2O60687 465 aaPredicted RBP3.01□□□□□ -1.93
SMC6-208ENST00000481708 ZNF3P17036 446 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 EEF1B2P24534 225 aaKnown RBP3.01□□□□□ -1.93
SMC6-208ENST00000481708 YWHAQP27348 245 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 NMT1P30419 496 aaKnown RBP3.01□□□□□ -1.93
SMC6-208ENST00000481708 TPTEP56180 551 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 GK3PQ14409 553 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 SYCP1Q15431 976 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 TEX44Q53QW1 395 aa3.01□□□□□ -1.93
SMC6-208ENST00000481708 EFHC1Q5JVL4 640 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms