RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
RAPGEF1-207ENST00000481260 FBN2P35556 2912 aa10.51□□□□□ -0.73
RAPGEF1-207ENST00000481260 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 DCHS2Q6V1P9 2916 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 LRRC3CA6NJW4 275 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 C17orf51A8MQB3 221 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 PIP5K1BO14986 540 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 CDC40O60508 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SLC19A2O60779 497 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 GLSO94925 669 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 ATP1B1P05026 303 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 FBXO45P0C2W1 286 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 CSNK2A2P19784 350 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 EFNA1P20827 205 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 GALNSP34059 522 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 EMDP50402 254 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 PPIAP62937 165 aaKnown RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 C2orf80Q0P641 193 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 IMPG1Q17R60 797 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 RFTN2Q52LD8 501 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SPIN4Q56A73 249 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 NOXRED1Q6NXP6 359 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 MYO7BQ6PIF6 2116 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 NPSR1Q6W5P4 371 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 RTL4Q6ZR62 310 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SLC29A4Q7RTT9 530 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 WDR53Q7Z5U6 358 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 TICAM1Q8IUC6 712 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 VWA5B2Q8N398 1253 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 RPRMLQ8N4K4 120 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 FAM13CQ8NE31 585 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 OR7G2Q8NG99 324 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 OR5L2Q8NGL0 311 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 CTHRC1Q96CG8 243 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SPACA9Q96E40 222 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SMC6Q96SB8 1091 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 PELOQ9BRX2 385 aaKnown RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 TTTY12Q9BZ98 90 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 IQCGQ9H095 443 aaKnown RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 PFDN4Q9NQP4 134 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 NMRK1Q9NWW6 199 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 SIRT5Q9NXA8 310 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 PLEKHB1Q9UF11 243 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 BCAP29Q9UHQ4 241 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 CNOT11Q9UKZ1 510 aaKnown RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 STK38LQ9Y2H1 464 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 ZNF835Q9Y2P0 537 aa10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 CHCHD2Q9Y6H1 151 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF1-207ENST00000481260 A0A1B0GTH9 108 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 C2orf92A0A1B0GVN3 265 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ATP6AP2A0A1C7CYW4 349 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ADAM10O14672 748 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TFECO14948 347 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 RGS16O15492 202 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 AKAP10O43572 662 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 NPHS1O60500 1241 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SEC22BO75396 215 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ATP6AP2O75787 350 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 RSL1D1O76021 490 aaKnown RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SDC1P18827 310 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 CA7P43166 264 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 MAGEA5P43359 124 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SERPINB4P48594 390 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TRA2BP62995 288 aaKnown RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ADORA2A-AS1P86434 159 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 MAP4K2Q12851 820 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 OPN5Q6U736 354 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SPPL2CQ8IUH8 684 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 LRRC25Q8N386 305 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TMEM251Q8N6I4 163 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 OR4N2Q8NGD1 307 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TWIST2Q8WVJ9 160 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 RELTQ969Z4 430 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 CIDECQ96AQ7 238 aaPredicted RBP10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 CCDC120Q96HB5 630 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ART5Q96L15 291 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 FCRL1Q96LA6 429 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TSSK3Q96PN8 268 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 FAIM2Q9BWQ8 316 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 LRTM1Q9HBL6 345 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 SLC35C2Q9NQQ7 365 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 TRAF6Q9Y4K3 522 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 CSMD1Q96PZ7 3565 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 LRBAP50851 2863 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 ZNF407Q9C0G0 2248 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 PCNX1Q96RV3 2341 aa10.49□□□□□ -0.73
RAPGEF1-207ENST00000481260 NCKAP5O14513 1909 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 SYNDIG1LA6NDD5 238 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 GOLGA6L10A6NI86 522 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 OR6C76A6NM76 312 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 MYO1GB0I1T2 1018 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 B4DXG7 233 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 CCL21O00585 134 aa10.48□□□□□ -0.73
RAPGEF1-207ENST00000481260 LSM1O15116 133 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms