RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ATP6AP1Q15904 470 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 LRRC26Q2I0M4 334 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 OR2T4Q8NH00 348 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 LILRB4Q8NHJ6 448 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ECHDC3Q96DC8 303 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TCEAL4Q96EI5 215 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM168Q9H0V1 697 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 COMMD3Q9UBI1 195 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 AASSQ9UDR5 926 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PTPRZ1P23471 2315 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PEX14O75381 377 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 F11P03951 625 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 H2BFMP0C1H6 154 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 AHRP35869 848 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF140P52738 457 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 DCAF7P61962 342 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 RIN1Q13671 783 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 MAD2L1BPQ15013 274 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ENPP6Q6UWR7 440 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF767PQ75MW2 155 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TCEANCQ8N8B7 351 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 GPR26Q8NDV2 337 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 KCNN1Q92952 543 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 DDIT4LQ96D03 193 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF778Q96MU6 729 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF285Q96NJ3 590 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TUBA1CQ9BQE3 449 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TTYH2Q9BSA4 534 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 BTNL2Q9UIR0 455 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PRSS38A1L453 326 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF806P0C7X5 589 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PNMTP11086 282 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HOXD9P28356 352 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 MELKQ14680 651 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ARL6IP1Q15041 203 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 OR4D1Q15615 310 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HSD17B12Q53GQ0 312 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 EIF5AL1Q6IS14 154 aaKnown RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ANKRD26P1Q6NSI1 321 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TMEM107Q6UX40 140 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TREML1Q86YW5 311 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TDHQ8IZJ6 230 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 CLEC1AQ8NC01 280 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ERMAPQ96PL5 475 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 IL37Q9NZH6 218 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 CPNE7Q9UBL6 633 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 EIF3KQ9UBQ5 218 aaKnown RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HSPE1-MOB4S4R3N1 261 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 MYH3P11055 1940 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 TRAPPC13A5PLN9 417 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF878C9JN71 531 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HSPA12AO43301 675 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 SDC3O75056 442 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 NDUFV2P19404 249 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HLA-FP30511 346 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ACTA2P62736 377 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ACTG2P63267 376 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 SIM1P81133 766 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF627Q7L945 461 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 HSD11B1LQ7Z5J1 315 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PPP1R3BQ86XI6 285 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 OR52B6Q8NGF0 335 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 OR6N2Q8NGY6 317 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 NINJ1Q92982 152 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 SLC7A6OSQ96CW6 309 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 NTMT1Q9BV86 223 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 BOCQ9BWV1 1114 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 ZBTB20Q9HC78 741 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 CCM2LQ9NUG4 571 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-216ENST00000481242 IL20Q9NYY1 176 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 KLHL21Q9UJP4 597 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 GNG8Q9UK08 70 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 DNAJC15Q9Y5T4 150 aa9.01□□□□□ -0.97
GARNL3-216ENST00000481242 COL16A1Q07092 1604 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 ABCB7O75027 752 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 CH25HO95992 272 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ADAP00813 363 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 MT-ND2P03891 347 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HRGP04196 525 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 PVALBP20472 110 aaPredicted RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 ERP29P30040 261 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 UBE2NP61088 152 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 TAGLNQ01995 201 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 OGFOD2Q6N063 350 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 MCATQ8IVS2 390 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
GARNL3-216ENST00000481242 GHDCQ8N2G8 530 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ZNF565Q8N9K5 539 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 OR5AR1Q8NGP9 310 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 THAP4Q8WY91 577 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 PMM1Q92871 262 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 S100A16Q96FQ6 103 aaKnown RBP9□□□□□ -0.97
GARNL3-216ENST00000481242 ARL5BQ96KC2 179 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 FAM129BQ96TA1 746 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 ALOXE3Q9BYJ1 711 aa9□□□□□ -0.97
GARNL3-216ENST00000481242 HEBP1Q9NRV9 189 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms